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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001471
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We have found 317 results. Now displaying 7 of 7 with 50 rows per page. This search has taken 5.393s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0289200.1
n.a. Ethylene-responsive transcription factor; TAIR: AT2G33710.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|P93007|EF112_ARATH Ethylene-responsive transcription factor ERF112; TrEMBL-Plants: tr|A0A1J7HVF0|A0A1J7HVF0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0289200 LjG1.1_chr5 60592143 60595087 -
6 domain predictions
2 GO terms
LotjaGi5g1v0304800.1
n.a. Dehydration-responsive element binding factor protein; TAIR: AT5G52020.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q9FJ90|ERF25_ARATH Ethylene-responsive transcription factor ERF025; TrEMBL-Plants: tr|I1LDV3|I1LDV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0304800 LjG1.1_chr5 62296210 62298043 +
5 domain predictions
2 GO terms
LotjaGi5g1v0340400.1
n.a. Ethylene-responsive transcription factor; TAIR: AT1G68550.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q9CA27|EF118_ARATH Ethylene-responsive transcription factor ERF118; TrEMBL-Plants: tr|B0BLJ1|B0BLJ1_LOTJA CM0545.620.nc protein; Found in the gene: LotjaGi5g1v0340400 LjG1.1_chr5 65775998 65778751 -
6 domain predictions
2 GO terms
LotjaGi5g1v0340400.2
n.a. Ethylene-responsive transcription factor; TAIR: AT1G68550.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q9CA27|EF118_ARATH Ethylene-responsive transcription factor ERF118; TrEMBL-Plants: tr|B0BLJ1|B0BLJ1_LOTJA CM0545.620.nc protein; Found in the gene: LotjaGi5g1v0340400 LjG1.1_chr5 65776040 65778758 -
6 domain predictions
2 GO terms
LotjaGi6g1v0006000.1
n.a. Ethylene-responsive transcription factor; TAIR: AT3G23240.1 ethylene response factor 1; Swiss-Prot: sp|Q8LDC8|ERF92_ARATH Ethylene-responsive transcription factor 1B; TrEMBL-Plants: tr|G7I5D9|G7I5D9_MEDTR Ethylene-responsive transcription factor 1B; Found in the gene: LotjaGi6g1v0006000 LjG1.1_chr6 1231038 1232021 -
6 domain predictions
2 GO terms
LotjaGi6g1v0017800.1
n.a. Ethylene-responsive transcription factor; TAIR: AT5G51190.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q40478|ERF5_TOBAC Ethylene-responsive transcription factor 5; TrEMBL-Plants: tr|I3SB66|I3SB66_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0017800 LjG1.1_chr6 3102320 3104047 -
6 domain predictions
2 GO terms
LotjaGi6g1v0044600.1
n.a. Ethylene-responsive transcription factor, putative; TAIR: AT4G27950.1 cytokinin response factor 4; Swiss-Prot: sp|O04682|PTI6_SOLLC Pathogenesis-related genes transcriptional activator PTI6; TrEMBL-Plants: tr|A0A0L9VDI0|A0A0L9VDI0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0044600 LjG1.1_chr6 8401581 8403118 -
6 domain predictions
2 GO terms
LotjaGi6g1v0155200.1
n.a. Ethylene-responsive transcription factor, putative; TAIR: AT3G20310.1 ethylene response factor 7; Swiss-Prot: sp|Q9LDE4|ERF83_ARATH Ethylene-responsive transcription factor 7; TrEMBL-Plants: tr|A0A072UXV4|A0A072UXV4_MEDTR Ethylene response factor; Found in the gene: LotjaGi6g1v0155200 LjG1.1_chr6 43379907 43382224 -
6 domain predictions
2 GO terms
LotjaGi6g1v0199500.1
n.a. AP2-like ethylene-responsive transcription factor family; TAIR: AT1G16060.1 ARIA-interacting double AP2 domain protein; Swiss-Prot: sp|Q94AN4|AP2L1_ARATH AP2-like ethylene-responsive transcription factor At1g16060; TrEMBL-Plants: tr|A0A151UF47|A0A151UF47_CAJCA AP2-like ethylene-responsive transcription factor family; Found in the gene: LotjaGi6g1v0199500 LjG1.1_chr6 49617568 49619524 -
5 domain predictions
2 GO terms
LotjaGi6g1v0222200.1
n.a. Ethylene-responsive transcription factor; TAIR: AT1G19210.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q84QC2|ERF17_ARATH Ethylene-responsive transcription factor ERF017; TrEMBL-Plants: tr|I3SZ39|I3SZ39_MEDTR Ethylene-responsive transcription factor ERF017-like protein; Found in the gene: LotjaGi6g1v0222200 LjG1.1_chr6 52692887 52694021 +
6 domain predictions
2 GO terms
LotjaGi6g1v0252800.1
n.a. Ethylene-responsive transcription factor; TAIR: AT3G16770.1 ethylene-responsive element binding protein; Swiss-Prot: sp|P42736|RAP23_ARATH Ethylene-responsive transcription factor RAP2-3; TrEMBL-Plants: tr|A0A140WWF2|A0A140WWF2_LOTCO AP2/ERF; Found in the gene: LotjaGi6g1v0252800 LjG1.1_chr6 56513512 56516823 +
6 domain predictions
2 GO terms
LotjaGi6g1v0307900.1
n.a. Ethylene-responsive transcription factor; TAIR: AT5G18560.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q6J9Q2|ERF86_ARATH Ethylene-responsive transcription factor ERF086; TrEMBL-Plants: tr|V7C7U9|V7C7U9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0307900 LjG1.1_chr6 62515994 62517408 +
6 domain predictions
2 GO terms
LotjaGi6g1v0320000.1
n.a. Ethylene-responsive transcription factor; TAIR: AT5G19790.1 related to AP2 11; Swiss-Prot: sp|Q6J9S1|RA211_ARATH Ethylene-responsive transcription factor RAP2-11; TrEMBL-Plants: tr|V7BSI8|V7BSI8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0320000 LjG1.1_chr6 63673422 63675039 +
6 domain predictions
2 GO terms
LotjaGi6g1v0326300.1
n.a. Ethylene-responsive transcription factor, putative; TAIR: AT4G18450.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|O49515|ERF91_ARATH Ethylene-responsive transcription factor ERF091; TrEMBL-Plants: tr|I1M1X7|I1M1X7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0326300 LjG1.1_chr6 64152680 64153776 +
6 domain predictions
2 GO terms
LotjaGi6g1v0326400.1
n.a. Ethylene-responsive transcription factor, putative; TAIR: AT4G17500.1 ethylene responsive element binding factor 1; Swiss-Prot: sp|O04681|PTI5_SOLLC Pathogenesis-related genes transcriptional activator PTI5; TrEMBL-Plants: tr|G7IFJ0|G7IFJ0_MEDTR Ethylene response factor; Found in the gene: LotjaGi6g1v0326400 LjG1.1_chr6 64154497 64156059 -
6 domain predictions
2 GO terms
LotjaGi6g1v0329200.1
n.a. Ethylene-responsive transcription factor; TAIR: AT3G15210.1 ethylene responsive element binding factor 4; Swiss-Prot: sp|Q40477|ERF4_TOBAC Ethylene-responsive transcription factor 4; TrEMBL-Plants: tr|A0A140WWF9|A0A140WWF9_LOTCO AP2/ERF; Found in the gene: LotjaGi6g1v0329200 LjG1.1_chr6 64395502 64397841 +
6 domain predictions
2 GO terms
LotjaGi6g1v0329300.1
n.a. Ethylene-responsive transcription factor, putative; TAIR: AT1G28360.1 ERF domain protein 12; Swiss-Prot: sp|Q94ID6|ERF81_ARATH Ethylene-responsive transcription factor 12; TrEMBL-Plants: tr|I3T849|I3T849_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0329300 LjG1.1_chr6 64419108 64420551 -
6 domain predictions
2 GO terms