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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001471
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 317 results. Now displaying 3 of 7 with 50 rows per page. This search has taken 5.608s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2315340.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Glycine max] gi|356522248|ref|XP_003529759.1| chr3 28288846 28290212 +
7 domain predictions
2 GO terms
Lj3g3v2454420.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF023-like [Cicer arietinum] gi|502156835|ref|XP_004510664.1| chr3 30323258 30324346 +
7 domain predictions
2 GO terms
Lj3g3v2575860.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-12-like isoform X1 [Cicer arietinum] gi|502156606|ref|XP_004510558.1| chr3 31401963 31405298 +
7 domain predictions
2 GO terms
Lj3g3v2612440.1
n.a. AP2-like ethylene-responsive transcription factor ANT [Medicago truncatula] gi|357513955|ref|XP_003627266.1| chr3 32163063 32165456 -
7 domain predictions
2 GO terms
Lj3g3v2612450.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL1-like [Glycine max] gi|356560162|ref|XP_003548364.1| chr3 32165824 32167212 -
2 domain predictions
2 GO terms
Lj3g3v3107620.2
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum] gi|502145380|ref|XP_004506004.1| chr3 38925093 38928773 -
7 domain predictions
2 GO terms
Lj3g3v3107620.3
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356544634|ref|XP_003540753.1| chr3 38925093 38928773 -
6 domain predictions
2 GO terms
Lj3g3v3107620.4
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr3 38925093 38927047 -
5 domain predictions
2 GO terms
Lj3g3v3245260.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr3 40051012 40054555 -
6 domain predictions
2 GO terms
Lj3g3v3752200.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Glycine max] gi|356531728|ref|XP_003534428.1| chr3 45392012 45393201 -
7 domain predictions
2 GO terms
Lj4g3v0586770.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237569|dbj|BAG50061.1| chr4 9282338 9283051 +
7 domain predictions
2 GO terms
Lj4g3v0708640.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356514362|ref|XP_003525875.1| chr4 11679747 11683614 -
7 domain predictions
2 GO terms
Lj4g3v1221570.1
n.a. dehydration-responsive element binding protein 6 [Glycine max] gi|351726616|ref|NP_001235341.1| chr4 18203263 18203805 +
7 domain predictions
2 GO terms
Lj4g3v1223730.1
n.a. Ethylene-responsive transcription factor TINY [Medicago truncatula] gi|357476799|ref|XP_003608685.1| chr4 18278665 18280210 +
7 domain predictions
2 GO terms
Lj4g3v1333550.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1D-like [Cicer arietinum] gi|502176076|ref|XP_004515794.1| chr4 20585082 20585744 -
2 domain predictions
2 GO terms
Lj4g3v1333590.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1D-like [Cicer arietinum] gi|502176076|ref|XP_004515794.1| chr4 20599621 20600406 +
7 domain predictions
2 GO terms
Lj4g3v1333610.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1D-like [Cicer arietinum] gi|502176076|ref|XP_004515794.1| chr4 20608377 20608693 +
7 domain predictions
2 GO terms
Lj4g3v1334860.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1D-like [Cicer arietinum] gi|502176076|ref|XP_004515794.1| chr4 20765713 20767004 -
7 domain predictions
2 GO terms
Lj4g3v1770570.1
n.a. Ethylene-responsive transcription factor [Medicago truncatula] gi|357477723|ref|XP_003609147.1| chr4 25130987 25131925 +
7 domain predictions
2 GO terms
Lj4g3v2120330.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max] gi|356546106|ref|XP_003541472.1| chr4 28951628 28958604 +
7 domain predictions
2 GO terms
Lj4g3v2120330.2
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max] gi|356546106|ref|XP_003541472.1| chr4 28956399 28958604 +
7 domain predictions
2 GO terms
Lj4g3v2214780.1
n.a. Ethylene-responsive transcription factor RAP2-9 [Medicago truncatula] gi|357450169|ref|XP_003595361.1| chr4 30338338 30339606 -
7 domain predictions
2 GO terms
Lj4g3v2290260.1
n.a. ethylene-responsive transcription factor RAP2-3-like [Glycine max] gi|374253830|ref|NP_001243393.1| chr4 31857578 31859223 -
7 domain predictions
2 GO terms
Lj4g3v2369440.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF086-like [Glycine max] gi|356519988|ref|XP_003528650.1| chr4 32625153 32625905 -
7 domain predictions
2 GO terms
Lj4g3v2604280.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF015-like [Glycine max] gi|356525286|ref|XP_003531257.1| chr4 35166016 35167611 +
7 domain predictions
2 GO terms
Lj4g3v2775600.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237573|dbj|BAG50063.1| chr4 37194296 37196219 +
7 domain predictions
2 GO terms
Lj4g3v2820190.1
n.a. dehydration responsive element binding protein [Trifolium repens] gi|289540950|gb|ADD09620.1| chr4 37680906 37683252 +
7 domain predictions
2 GO terms
Lj4g3v2871880.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF114-like [Vitis vinifera] gi|225456495|ref|XP_002280924.1| chr4 38402735 38406087 -
7 domain predictions
2 GO terms
Lj4g3v3002550.1
n.a. PREDICTED: ethylene-responsive transcription factor CRF2-like [Cicer arietinum] gi|502139611|ref|XP_004503833.1| chr4 39704775 39705764 +
7 domain predictions
2 GO terms
Lj4g3v3055130.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum] gi|502138606|ref|XP_004503470.1| chr4 40714580 40715990 -
7 domain predictions
2 GO terms
Lj5g3v0712260.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1F-like [Glycine max] gi|356548375|ref|XP_003542578.1| chr5 10651457 10652137 -
7 domain predictions
2 GO terms
Lj5g3v1015320.1
n.a. PREDICTED: ethylene-responsive transcription factor 5-like [Cicer arietinum] gi|502152486|ref|XP_004508947.1| chr5 16712564 16713151 +
3 domain predictions
2 GO terms
Lj5g3v1062530.1
n.a. PREDICTED: ethylene-responsive transcription factor 1B-like [Glycine max] gi|356545857|ref|XP_003541350.1| chr5 17284444 17285398 +
7 domain predictions
2 GO terms
Lj5g3v1062540.1
n.a. n.a. chr5 17284552 17297631 -
7 domain predictions
2 GO terms
Lj5g3v1072600.1
n.a. PREDICTED: ethylene-responsive transcription factor 1B-like [Glycine max] gi|356545859|ref|XP_003541351.1| chr5 17333764 17334579 +
7 domain predictions
2 GO terms
Lj5g3v1156330.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF098-like [Fragaria vesca subsp]. vesca] gi|470111959|ref|XP_004292207.1| chr5 18439091 18439929 +
7 domain predictions
2 GO terms
Lj5g3v1167370.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237553|dbj|BAG50053.1| chr5 18503361 18505203 +
7 domain predictions
2 GO terms
Lj5g3v1602450.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237577|dbj|BAG50065.1| chr5 23405516 23406929 -
7 domain predictions
2 GO terms
Lj5g3v1697290.1
n.a. n.a. chr5 24204496 24209758 -
7 domain predictions
2 GO terms
Lj5g3v1697360.1
n.a. PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Glycine max] gi|356535482|ref|XP_003536274.1| chr5 24245192 24250352 -
7 domain predictions
2 GO terms
Lj5g3v1776170.1
n.a. DNA-binding protein [Galega orientalis] gi|209419749|gb|ACI46678.1| chr5 25321211 25322993 -
6 domain predictions
2 GO terms
Lj5g3v1937400.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF110-like [Cicer arietinum] gi|502118939|ref|XP_004496448.1| chr5 27342323 27358508 -
7 domain predictions
2 GO terms
Lj5g3v1937410.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF110-like [Cicer arietinum] gi|502118939|ref|XP_004496448.1| chr5 27356084 27358508 -
7 domain predictions
2 GO terms
Lj5g3v2028390.1
n.a. CRT/DRE binding factor 4 [Medicago truncatula] gi|302952543|gb|ADL74429.1| chr5 28658102 28659737 -
7 domain predictions
2 GO terms
Lj5g3v2300330.1
n.a. PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g50680-like [Cicer arietinum] gi|502121892|ref|XP_004497481.1| chr5 34012010 34013032 +
5 domain predictions
2 GO terms
Lj6g3v0030190.1
n.a. PREDICTED: ethylene-responsive transcription factor 1B-like [Cicer arietinum] gi|502122629|ref|XP_004497839.1| chr6 631468 632462 -
7 domain predictions
2 GO terms
Lj6g3v0841450.1
n.a. PREDICTED: ethylene-responsive transcription factor 7-like [Cicer arietinum] gi|502166427|ref|XP_004513889.1| chr6 8427500 8429565 -
7 domain predictions
2 GO terms
Lj6g3v1048880.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Glycine max] gi|356514511|ref|XP_003525949.1| chr6 11804844 11807696 +
6 domain predictions
2 GO terms
Lj6g3v1175110.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF017-like [Glycine max] gi|356530453|ref|XP_003533795.1| chr6 14296970 14297201 +
3 domain predictions
2 GO terms
Lj6g3v1931790.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF086-like [Glycine max] gi|356519988|ref|XP_003528650.1| chr6 21928234 21929545 +
7 domain predictions
2 GO terms