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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001900
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.333s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0154400.1
n.a. DIS3-like exonuclease 2; TAIR: AT1G77680.1 Ribonuclease II/R family protein; Swiss-Prot: sp|P0DM58|DI3L2_ARATH DIS3-like exonuclease 2; TrEMBL-Plants: tr|A0A0R0GK53|A0A0R0GK53_SOYBN DIS3-like exonuclease 2; Found in the gene: LotjaGi1g1v0154400 LjG1.1_chr1 27381207 27390382 +
3 domain predictions
2 GO terms
LotjaGi3g1v0225700.1
n.a. DIS3-like exonuclease 2; TAIR: AT5G02250.1 Ribonuclease II/R family protein; Swiss-Prot: sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MSB1|K7MSB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225700 LjG1.1_chr3 34752622 34768442 -
3 domain predictions
2 GO terms
LotjaGi3g1v0225700.2
n.a. DIS3-like exonuclease 2; TAIR: AT5G02250.1 Ribonuclease II/R family protein; Swiss-Prot: sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MSB1|K7MSB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0225700 LjG1.1_chr3 34752622 34768442 -
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.1
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529003 20555632 +
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.2
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529555 20554784 +
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.3
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529555 20554784 +
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.4
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529555 20554784 +
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.5
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20530031 20554784 +
3 domain predictions
2 GO terms
LotjaGi4g1v0138200.6
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|V7AVD4|V7AVD4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20531376 20554784 +
3 domain predictions
2 GO terms