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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0135640 |
| Transcript ID | Lj4g3v0135640.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | aspartic proteinase [Vigna unguiculata] gi|20800441|gb|AAB03843.2| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| ProSiteProfiles | 1 | 22 | 22 | 6 | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| PANTHER | 7 | 314 | 308 | 6.70E-284 | ||
| PANTHER | 7 | 314 | 308 | 6.70E-284 | – | |
| SUPERFAMILY | 14 | 317 | 304 | 3.71E-119 | ||
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 511 | 489 | – | – | |
| CDD | 79 | 511 | 433 | 0 | ||
| Gene3D | 80 | 168 | 89 | 1.40E-31 | ||
| Pfam | 88 | 511 | 424 | 3.90E-134 | ||
| ProSiteProfiles | 89 | 511 | 423 | 74.227 | ||
| PRINTS | 95 | 115 | 21 | 9.70E-29 | ||
| ProSitePatterns | 104 | 115 | 12 | – | ||
| Gene3D | 169 | 316 | 148 | 2.30E-95 | ||
| PRINTS | 241 | 254 | 14 | 9.70E-29 | ||
| ProSitePatterns | 291 | 302 | 12 | – | ||
| PRINTS | 291 | 302 | 12 | 9.70E-29 | ||
| Gene3D | 317 | 356 | 40 | 3.70E-10 | ||
| ProSiteProfiles | 319 | 359 | 41 | 13.168 | ||
| SUPERFAMILY | 320 | 423 | 104 | 1.50E-25 | ||
| Pfam | 322 | 355 | 34 | 5.20E-13 | ||
| ProSiteProfiles | 384 | 425 | 42 | 11.218 | ||
| Gene3D | 386 | 428 | 43 | 2.10E-09 | ||
| Pfam | 387 | 423 | 37 | 1.10E-14 | ||
| PANTHER | 416 | 511 | 96 | 6.70E-284 | – | |
| PANTHER | 416 | 511 | 96 | 6.70E-284 | ||
| SUPERFAMILY | 423 | 511 | 89 | 3.71E-119 | ||
| Gene3D | 431 | 511 | 81 | 2.30E-95 | ||
| PRINTS | 487 | 502 | 16 | 9.70E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj4g3v0135640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0135640.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.