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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002298
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.307s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0104419.1
n.a. DNA polymerase [Medicago truncatula] gi|357459413|ref|XP_003599987.1| chr0 44674450 44680962 +
2 domain predictions
2 GO terms
Lj0g3v0245739.1
n.a. PREDICTED: DNA polymerase I-like [Glycine max] gi|356500355|ref|XP_003518998.1| chr0 127419365 127421922 -
2 domain predictions
2 GO terms
Lj0g3v0350249.1
n.a. PREDICTED: DNA polymerase theta-like [Cicer arietinum] gi|502124469|ref|XP_004498542.1| chr0 184001670 184012120 -
2 domain predictions
2 GO terms
Lj2g3v3138170.1
n.a. DNA polymerase [Medicago truncatula] gi|357494395|ref|XP_003617486.1| chr2 40544139 40547309 +
2 domain predictions
2 GO terms
LotjaGi1g1v0034300_LC.2
n.a. DNA polymerase; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2PWM4|A0A0B2PWM4_GLYSO DNA polymerase I; Found in the gene: LotjaGi1g1v0034300_LC LjG1.1_chr1 4505649 4506827 +
2 domain predictions
2 GO terms
LotjaGi1g1v0035300_LC.1
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7K3G7|G7K3G7_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi1g1v0035300_LC LjG1.1_chr1 4741494 4748257 -
3 domain predictions
2 GO terms
LotjaGi1g1v0198600.1
n.a. DNA helicase; TAIR: AT4G32700.2 MUS308 and mammalian DNA polymerase-like protein; Swiss-Prot: sp|Q588V7|TEB_ARATH Helicase and polymerase-containing protein TEBICHI; TrEMBL-Plants: tr|K7M6P7|K7M6P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198600 LjG1.1_chr1 41764309 41801739 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098200.1
n.a. 5'-3' exonuclease; TAIR: AT1G34380.2 5'-3' exonuclease family protein; Swiss-Prot: sp|O67550|EX53_AQUAE 5'-3' exonuclease; TrEMBL-Plants: tr|K7MHK5|K7MHK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0098200 LjG1.1_chr2 32089881 32108363 -
2 domain predictions
2 GO terms
LotjaGi4g1v0069300.1
n.a. Flap endonuclease Xni; TAIR: AT3G52050.1 5'-3' exonuclease family protein; Swiss-Prot: sp|O52225|DPO1_THEFI DNA polymerase I, thermostable; TrEMBL-Plants: tr|A0A0S3R340|A0A0S3R340_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0069300 LjG1.1_chr4 8744166 8755534 +
2 domain predictions
2 GO terms
LotjaGi4g1v0197800.1
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 LjG1.1_chr4 45474277 45495538 +
3 domain predictions
2 GO terms
LotjaGi4g1v0197800.2
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 LjG1.1_chr4 45474277 45495538 +
3 domain predictions
2 GO terms
LotjaGi4g1v0197800.4
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151U285|A0A151U285_CAJCA DNA polymerase I; Found in the gene: LotjaGi4g1v0197800 LjG1.1_chr4 45488434 45494619 +
3 domain predictions
2 GO terms
LotjaGi6g1v0163900.1
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J1V4|G7J1V4_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi6g1v0163900 LjG1.1_chr6 44774589 44801031 -
3 domain predictions
2 GO terms
LotjaGi6g1v0163900.2
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2NWI0|A0A0B2NWI0_GLYSO DNA polymerase I; Found in the gene: LotjaGi6g1v0163900 LjG1.1_chr6 44775505 44788681 -
3 domain predictions
2 GO terms