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Lj0g3v0245739.1

Overview

Field Value
Gene ID Lj0g3v0245739
Transcript ID Lj0g3v0245739.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: DNA polymerase I-like [Glycine max] gi|356500355|ref|XP_003518998.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00482
1 134 134 5.10E-07
IPR001098
PANTHER
PTHR10133
1 174 174 4.50E-99 –
PANTHER
PTHR10133:SF34
1 174 174 4.50E-99 –
Pfam
PF00476
2 171 170 6.80E-40
IPR001098
SUPERFAMILY
SSF56672
2 172 171 1.06E-43 –
Gene3D
G3DSA:1.10.150.20
2 92 91 3.70E-21 –
PRINTS
PR00868
55 66 12 1.20E-11
IPR002298
PRINTS
PR00868
87 103 17 1.20E-11
IPR002298
Gene3D
G3DSA:3.30.70.370
93 171 79 1.10E-19 –
PRINTS
PR00868
117 130 14 1.20E-11
IPR002298

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0003887
Molecular function DNA-directed DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group.
Subterm of
GO:0006260
Biological process DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
Subterm of
GO:0006261
Biological process DNA-dependent DNA replication A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj0g3v0245739.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0245739.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.