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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002452
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.426s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2095980.1
n.a. Tubulin alpha-7 chain [Medicago truncatula] gi|357466771|ref|XP_003603670.1| chr1 25043058 25044993 -
2 domain predictions
4 GO terms
Lj1g3v3975290.1
n.a. PREDICTED: tubulin alpha-1 chain [Vitis vinifera] gi|225435758|ref|XP_002285721.1| chr1 46797930 46801574 +
2 domain predictions
4 GO terms
Lj1g3v3975300.1
n.a. alpha-tubulin, partial [Populus alba] gi|403329628|gb|AFR42124.1| chr1 46801074 46801782 +
2 domain predictions
4 GO terms
Lj4g3v2604350.1
n.a. RecName: Full=Tubulin alpha-3 chain; AltName: Full=Alpha-3-tubulingi|2511535|gb|AAC05719.1| alpha-tubulin 3 [Eleusine indica] gi|6094431|sp|O22349.1|TBA3_ELEIN chr4 35169577 35172212 -
2 domain predictions
4 GO terms
Lj5g3v2065190.1
n.a. PREDICTED: tubulin alpha chain-like [Cicer arietinum] gi|502120143|ref|XP_004496862.1| chr5 29924004 29927705 -
2 domain predictions
4 GO terms
LotjaGi1g1v0412500.1
n.a. Tubulin alpha chain; TAIR: AT1G04820.1 tubulin alpha-4 chain; Swiss-Prot: sp|P46259|TBA1_PEA Tubulin alpha-1 chain; TrEMBL-Plants: tr|A0A0L9UGJ9|A0A0L9UGJ9_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0412500 LjG1.1_chr1 90374350 90376623 -
2 domain predictions
4 GO terms
LotjaGi1g1v0412500.2
n.a. Tubulin alpha chain; TAIR: AT4G14960.1 Tubulin/FtsZ family protein; Swiss-Prot: sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain; TrEMBL-Plants: tr|W9QUC8|W9QUC8_9ROSA Tubulin alpha chain; Found in the gene: LotjaGi1g1v0412500 LjG1.1_chr1 90374628 90376319 -
2 domain predictions
4 GO terms
LotjaGi1g1v0643600.1
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain; TrEMBL-Plants: tr|I1ML11|I1ML11_SOYBN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0643600 LjG1.1_chr1 120093672 120103499 +
2 domain predictions
4 GO terms
LotjaGi1g1v0643600.2
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain; TrEMBL-Plants: tr|I1ML11|I1ML11_SOYBN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0643600 LjG1.1_chr1 120093672 120103914 +
2 domain predictions
4 GO terms
LotjaGi2g1v0077400_LC.1
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q02245|TBA5_MAIZE Tubulin alpha-5 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi2g1v0077400_LC LjG1.1_chr2 20767638 20770998 +
2 domain predictions
4 GO terms
LotjaGi2g1v0077400_LC.2
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q02245|TBA5_MAIZE Tubulin alpha-5 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi2g1v0077400_LC LjG1.1_chr2 20767665 20770871 +
2 domain predictions
4 GO terms
LotjaGi2g1v0107000.1
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|P28752|TBA1_ORYSJ Tubulin alpha-1 chain; TrEMBL-Plants: tr|A0A0L9VLH4|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000 LjG1.1_chr2 36442927 36447872 +
2 domain predictions
4 GO terms
LotjaGi2g1v0107000.2
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A0L9VLH4|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000 LjG1.1_chr2 36443124 36447569 +
2 domain predictions
4 GO terms
LotjaGi2g1v0107000.3
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A0L9VLH4|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000 LjG1.1_chr2 36443124 36447592 +
2 domain predictions
4 GO terms
LotjaGi4g1v0376700.1
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700 LjG1.1_chr4 75572446 75577096 -
2 domain predictions
4 GO terms
LotjaGi4g1v0376700.2
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700 LjG1.1_chr4 75574437 75576607 -
2 domain predictions
4 GO terms
LotjaGi4g1v0376700.3
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700 LjG1.1_chr4 75574447 75576607 -
2 domain predictions
4 GO terms
LotjaGi4g1v0376700.4
n.a. Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|Q56WH1|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr|A0A151TKV5|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700 LjG1.1_chr4 75574456 75576607 -
2 domain predictions
4 GO terms
LotjaGi5g1v0319800.1
n.a. Tubulin alpha chain; TAIR: AT1G04820.1 tubulin alpha-4 chain; Swiss-Prot: sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain; TrEMBL-Plants: tr|A0A1J7FT38|A0A1J7FT38_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0319800 LjG1.1_chr5 63706086 63710038 -
2 domain predictions
4 GO terms