Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0643600.1

Overview

Field Value
Gene ID LotjaGi1g1v0643600
Transcript ID LotjaGi1g1v0643600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain; TrEMBL-Plants: tr|I1ML11|I1ML11_SOYBN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0643600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:120093672..120103499) extracted from Lotus japonicus Gifu genome v1.2.

TAAATGAAATGGATCTTTCTTGCCACAAAGTCACCAAATTTTAAATTAGAAGACTTGTATGGGAAAAAAAAAAACTTTTA TTGAACATAGTGTGTATATTTTCATTCAGACAACTAATATACATTATACAAAGAAGTTTCTCTCAAATTTACATGCATGT TTGCTTTCTCCCAAATCCAACTCATACAACAACATCTTTTAGCTAATACTAAAATTAGCAAAACAGAGATAGATAAGACT AAGTTCTCAAGCTTCATTTACTGCAGCTTGAGGAATATATCTGAAAAGTGAACTCTTTGGTACCCTCAAAATGACTACAC CAAGATTGTTAGTTTGGACATGAGATTTGATATTATTACCTAGCAGATGATGATGATGACTTGCCCAGAGAAACAGATGC CAGAGATGATGCCCAAACCCGTACACTCCTCGCCCTTTCATGAAAGTTCCTGGTTTTGCATAGTCTTAGCTTGGTCCAAA CACTCCTGACATCAATAAGATTAAGAACACGCCCAATCACTTGGCTTGTCTCGCCGAATATTTGCAAGTTCAAACGAGGA GCGTAGGAATCCCAGAAGGCTTGGAGATGCGGCATAATCTCGGGAAAGACAAAGAGAATGATCCTCAAACAGAGAAACAA TATAGATACTGCTAAGTAAGGTTCCCTGCTTGACAATTCTTTCAGGGAGAAGCCCATGAATGACACATTTGAATGTTCAT CACTCATCAAACTGCTTAGATGACCAGAATCAATATGATCCCTCGCCTGAAATCCTGAGACAAAAAAACAAGGTCAACTG AAGCATATACTTACATGGTACGGTCTTTTTCATTTAGCAGCCAATGAACTTTGTTAATTCCATGTAAATGCTTGTACATT AATTTTCAAAGTGCATTTAGAAACAGAAAAAAAAAAGGACGACTCAAAGCTATAAATCAGAACCAGGTAAAAATGGCAGT GTTGAAAATCCATAAAAATATTTACAAACTTACAAACTAAGATTCAGGATTTGTTTACCTGTGTTTCTCTCGTAAAATTC AACGATGGAGTTTAGATTTTTTGCACCAAGATATCTCACCCTAGATGTCTGGTTCACCAGTAAGATAGCAGGCAAGCTAT GGATCCTATATTTCGAATATAAGCTGCAGGGAAAACCATATGTCCAGACACATCAGAAGACACTTATAAAGTTTTTGCCA ATTGAATATGCAATATTTTCTGCTGAACTTCAAATTTTTATGTACTTATTACAATGTAGTATGAAAAAAAAAAAATCTAC TTTGAAGTGCCAAGGTTTTCTGCTGAACAATCATGGATTATACTAGCCAAATGCAGACTGAGGCACTGCTGAACAAAGAA TGGAACTAACAGCTGCAACTTGTTTTCAATCGCAAACTATGCAAGTAGCACACAGAAAAAGAAATAAATTTCATTAGTTT CTAGAAACAAGGGACAAAAGCAGAGATAGCTTCAAAACCTTGGCAAAGCAGATGATTGTTCAAGTGCCACATGCTCTACT TGAGGAAACATTGAACTAAGGATTTCAAATTCAGAAAGCATTCTGCGTGAAAAAGGGCACCAGGAAGCATAAAAGAGTAT AGAAATGTAACCGACTCTCTTCCTTCCAGACAAAACCCTTTCTACGAAATTCCCATCCACCTGAAGAAATCAATAGGAAA AATGAAATACATGTAATGTAACCGGATATGCAAACTGATACAAAGTGAAAGTTCAAAATCCACAGTGATTAAGGCTTTTA ACTGAAGCAAATTTATACAGAATCGCCCAGGACACACATGAAGACGTCTAATTGTCATTTTGAAACTTTGAGCTTCACCT AGTAAACTTTTCTAATATTGAGCAATAAACAGATTATAGGCTAGATAAATGGACTTCGCATTAGATCTCAGTATAACAAC ATGCTTATCAGTTACCTCGTTTCCAAGAATATGAATTATGGCTTATATAAGGGCTCCACATAATGGAAACTATTCTAGAC AAGGACTTTATAGACATGGTCAGTTTCTTTCTCCCTTAACAAAGTAAAATCAGGACAAAATTCCAAATCTCCTCTATTTT GTTAACTCTACACAATGTACCATTTTGTTGATGGATTAATTAACAAAAGGCTCTAACAACAAGGAAAACAATATTTGAGA CAATATTTGGTTGTGCCTTCAATTACAGAGTAAATGATTTGATTAACATCATCCAAATGTCATCTAGTTTCATGAGGAAA AAAATTATTGTCATTCAAAAGATTTCACATGGATTTATTAATCTTTTCTATAAGAAACTCCAATGATTATGTCTCATCCT GCATTTGGAAGATCCTTGAGAAGATACATAACTAGTTAAATAATGCATTATACAGGGCATACCCTCAATAAAACACTGCA ATGCTAAAACTGAGAATTTTATGCAGCCTCCTCATCAATGTGATGAATTTTATAATTTTTTTATCACAAAGGATCACTCC CAAGATTGTTGTGGACGGCATCACAAGGAGACTTTTTATTCATGGCTACTTATGAGTTAACTCTAACAAGTTTTTGACTC TGGATACCAAAATCAAGTTAAATTTCTAACAAACTTGTTTCGGCATAAACTCAGGTGCACTTGCTTGAACTCAGAGACTT GCATGGAATTGCGAGTTTAGGATGACTAAGTATGTGTTCGTAAAAATATTTTAGAAAACGTAAATCAGCATTTTTTTCAC TCGAACAAATAGTTACTTTCACTTTTCCAACCTAGGAAAGCACGATTTACAATCCCAATGCAGAAATCGATAGGAAAACA GTGGCTGTAACAGTAACCAAACACAGCCTAAATGAGCCAACAATAGAATGGTTATTTTTCCCCAAACACAACCACTGACA ATCTTTCACTGTTTCTCAAAATCACAAAATGCAGCAGCTGTGAATGAAAGGGCTCATCATGCATAAAACATCAACTTCAC AGCAGCACAAACTCAATTCTATAGCTGCACCCAATGTGCGGTTGTGAACCAGCAGCAACAAAGATGGTGAATGAAGCTGC AATGATACAGCTCCCAGTGCTAACAAAGTCACAAACCTAAAGGCATGAATGAGGTAAGCCATTGTTGCAAGTTTGCAATG AACCCAGCCTCCGCCAACAAGGTGAACGAACCCAGTCCCAACATGGTGAATCCACCATTATTGTCATTCTTTAGTAATTC TGCATCACTTGATTTGTAAATTTATCCGTAAATTTTGAACTTATTATGCTTTTTGTTTACACTGAGCTATGAACCTATTC TGTGATTTGTGATTTTGTCCATCAATTTTAAATTAACATGCTTTGTTTGTGGACTAAGCTATGAACCAGTGGTTTGATGC CTAATTATGTTTGAACTAGCTAACCTTGGATGCCTAATGATCCGACAAAAGAAACCCCCGTGGTCCATACCCAATATAGC CAAAAGCACAAATGGTACAAACTACAAGATTAAGCACATTGATGATTTTCCTACTCTATAGTAGCAATGGAAATCTCTTA GGATCAAAGCATCAAAATGAATTCCATTGTTTTAAACAGGAAATTCCCAACATCCTATCATTCAATATCATACTCTTGTC TTTTGTCCATAATTTCCTACAAGATTCCTATGTAGTTTGTACTTGCTATTTGCCAACACCTAATATTCCGATTCCTCATT CACAAATTATCAATTCAGAACTCAATTCTTCTAATGAGAACTGAAACCCGTGAACCAAAAACACCATTAATCACAAGATA CAAAAAAAATAACAAATTGAAAATCAGCAAAGACATCATATCAATGAACAAAAACAAATTCCCACCATCAAAATCACATA AGAAAGCCAAAAAGCGCGTCAAAAAATGAAATTTGTAAGGGACATAGATGCAAGTACCTGAAGAGGAGGATTGGGGGTGA TGGCAAGGGAGCATTGAGATTGAAGAGCAAACAGAAAGGAAGCAGAAGATGGAGAAGGGGCAGACGAGGATTGTAGAAAA GAGAGACAAGTGATGAAGAAGAGAAAAAGCGAGGTCACCATTGAAGATTATGTTTATTTTGTGTAGAGTGAGGGAAGACA GCCCAAAAGGCTTGTGTTGTGTTGGGTGGTGGTATGCTATCATATGTTGTTGTTGTCGGTTTTAAGAATAATGTTGTGTT TGTCTCTTAAAACTCAAAAGTGTCTGGTAATGTTGATGGTTTTGAGGTGGCGTCCATTGAGGTGGGTTAAGGTGGAGGTG GATTAGCTATCATGGAGTGGGTAAAGAAAATGGCCCGGTTGGATTCAGTTTTGTTTGGTTTCATGGTTTGATGTGGGTTC TCAGAGTCATTTAATAGGCAAGTAGTCCATGGTTTAATTCTCAATTTTTTGTGAATGAAAAAAACTTACTATTGATGAGT CTTTATCATTTACTGTGCTAGCGAATGATTAGTTTCAAGACTACCAAGTTACTAAGTACCAAATGAGAAACTTAAGTTCA AAAAAAAAAACCTATGAGATACCTTGATAAAAAAAATCAATATATTGAGTATTCAGTATTCACATTACAATTTATTTTTT ATCTCATGTTTACGTCTTTTATCTTCTTATTTCTCTTTTTCTAGCACATTACTTATCATATCACTATTTTATTTCTCTTC TTATCTAAGTGTGGATGCCTTATTGTTGGTGTGAAGATATAATTTTTTTTTTCTTTCTAATCACTCATTTCCCAAAACAA CCTCATACAAAATGGCTTTTCTTGCTTTCAAAAAAAAAATTTAAATAAATCTTCATTCTTATTATTTTTCTTATTGTTAA CTTTATCTTATTGATTTTCATCAAGTTATTATAGTTGTTATTGTACGAGTAAGGGAATATCAAACTTGAGTATAAGATGT ATGTCCGGTGAGGCAATTTTGTTGCACTGCTCCTATATGGAAGGACCACGTTCTTCTCATATCTAGCGATCAGGTGGGAA TCAAATGTGGGTATCGGCAAGGCACGCTGACGCTCAAGTTGGCAGTGCTAATGAGAAATAAGGATTATGGTTGATCAAAT AGTATGCACTTGAAATGTGTCCCTCAACGTGTACATGTACTTAAGTTTGTAACAAACTTGTGGAGAATCAAGTGTGGATA TAATATCAATATATAACATATATTATTTGCTAATTTTTGATATTATCCTCATTCTCATAAACATCAGACTTAGTCAATAT TAGGCAAATATGTTGGGCAATTCATTTTATTATGTAACAATTTCCCCCTCACCACATCACATCAAGTGATTATGACCCGA CAACCAGGAAGGGTATGAAGCTCAAGAACGTACCAGACACTCATGACAACCTCGAACCACGTAAGCTCGACTTATATAAA AGGCAAGCCATGGAAGAACAAAAAAGGTACACCAATCCATAACTTCTCGACCGTTGTTTCCACCCACGTTCTAACTTCCA CCTCTGACGCTCTTGAAGAAGAGGAGCAGCCCCAGAACGCAAAGAATCGTCAATCCATCCAACAAAGACCATTACTTCCT CACCGTTCTCCATCTCACAACACTCACGTGAGTGATTTGGTCAGATTCGTCCAAACAGAATGTACAGAAATATCTGAATG ACATGTGGACAAAAAAAGCATGTCAGCATCAGTGTAGGTGAGGTGTCACTTGGCTGAATGGACATCAAATAGATATTTCA GGAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGAGTTGTTAATATCTCTTATCTTGGTGTGCATGT GATGGGATTTTGGATGAGTCATGACATGAAACAACAGCACACCAGACAAGGACGTTTACCCCCATAGATAGGTTAGATAA CCGACCAAAAGTCTCTTTAGCCTCACTAGCATTTGAGGGACCCCCTTTTGTTAATATCATCAACCCATCTTCATTTATTT AAGATCTTCAACAAACCTTTTGACAGTTTTGGCCTTCCTTCCTTTCACTCCTTAGTAAACGCTTGAGATATAGAATAAAT ATCAAAGGTTCTTACTTCTTATTTCCTTCCTTCCATTTTCCTTGTGATTTTCATTTTAAGCAGAGAGAGGGTGAGGAACT GAGGCACAGAAGATGAGGGAGGTCATAAGTATTCATATTGGACAAGCTGGAATTCAAGTGGGGAATTCATGTTGGGAGCT GTATTGCCTTGAGCATGGAATTCAACCTGATGGCATGATGCCAAGGTACACTGTTTTGTTTTGTTTTGCATGATCAATCA TGTTATATGTCTTGTTCACAAGAATTCTGTACTTGGTTGTACCATTTATGGAATTGGATTGATTTTTTAGGTCTTCTGCC GTTTTTTGTTTTTGTTTTGGAGATCAATTTACTGCTTTCAATGTAGGAAAGCTTAATTTTTTAAAGATTTCCAACTTGAT TGTCTTGCTCAGTTAGATTAGATGCAAGTCCTATAAGTTAATATGGGGTCTAAAGAAATCTTTGGTATAAAAAGTATCAA CATTTTTCATGTCAGTTATTGCATCTTAATATGTTTATTGAGAAACATAATAAGATGCATAAATAGGTTTACATTGTGAT ACTGTAATTGACATCTCTCATGAAAAGATAAAGACACATAAGTGGATCTGGAATAGTTGTAATGCTTTTAGTCATGTCGG TGACATATCTGAGTGATGTTCAAGTTTATTCTTCCAATTCAGATAAGAGATTTCATGAGCTCCACCTACTGATGAGTAAA AAAAGCAGCAACAGAAAGGGGATAGAAGTTACGAAAAAATATTGACTTGAATTTTTTGTCAGGTTAACATAATCAAGGGT TTGCCATTTATATATTGCCTCTTGCAGTATGTCGTTTCCTTCTGGTCTAAGTTATTAGCAATTCTCAATTTGAACTTGAA TTGTTATCTTCTCATAGGTGAAGTAGTATCCTCACAGATCCTTAAAAAGGTGATCGAAAAATCATGTTGTAACTTGTGAG GCTATTCTTGCTAATAAGAAACCCTTATTTTAAATTTGCACATATAAAAGGTTCATCAATTGCTGAGTGAACTTCTATTT GGATAGCTAAATGTTATGTAGGGCAGGGGCATTCAATTGTCCTAGGATACTACTTGTACTGAGTGGTTACTGGTTAGTAC TCTGTGCTCTGCTTAGACCAAAATAGAGCTGCCAAATGGAAACCAGGAACTCTTCACTTTGCATCAGTATCTTGCTACTC TATAATATGTTTAAACTTAATTTTGAAATTTTATGTTTGGTTTTTGAACTATAATTTATTTTTTTACTTTATTTCTGTAG TTTCCCATAAAATGATTTCTACTCCATTCCCACCCTAATTTCTATTGTTAACCTTTTAATTGACTGTCTCTGAAGTATCA GAAGACGGTATTTTTCTTCAGATTTTATACACTTGTTAATTTATATGGTAGATTTGTGGTGGAGTCTTAGTGTTGTGTTA GAACTTAGAACATAGAAAAATTTGAAGTCCAAATTCATATTGAAAGGATTTCATCCCCCTTTAAGCTTCTACACTACCCT GAAAATAGAACTTGATTTTTTACGTATTTCTCCCTTTTAGTTTGCCACAAATAATGCTTGATTTCTCTCTGCTTGCAGTG ATACCTCAGTTGGCATTTCAAATGATGCTTTTAACACCTTCTTCAGTGAAACGGGTTCCGGTAAGCATGTGCCGAGGGCT TTATTTGTTGATCTAGAACCTAGTGTTATTGATGAAGTAAGAACTGGTGAGTACAGACAACTCTTTCACCCTGAGCAGTT GATCTCTGGCAAGGAAGATGCTGCTAATAATTTTGCAAGGGGACACTATACTGGTAAGCCAATTCCCAGTGCAGATCAAA ATTGGTTAGTTTCTTCAATGCTTACTTTGCCATTTATTGTGCATCTATGCTGCAGTTGGAAGAGAAATTGTTGAACTATG CCTTGACCGGATCCGAAAATTAGCGGATAATTGCACTGGTTTGCAAGGATTCTTGGTTTTCAATGCTGTCGGTGGTGGTA CCGGTTCTGGTTTGGGATCATTACTTTTGGAACGGTTGTCTGTGGATTATGGGAAGAAGTCTAAACTTGGCTTTACCATC TATCCCTCTCCTCAGGTAGTTTCTTAACATCATTGGAAAATAAGAATGAAAGTAACATGATCTATTTGTGAAGCATCAAC ATTTGTTCCTGGTTTCTTAAATTCATGTTTTCAGCTTTTCTTATCAATTGTTTATGTAGATGTGTATATTATTATAGATT ATTCATGTGGAATCATGTTATGGTAATACTGTTTAATGTGCAGGTATCTACTGCAGTTGTTGAACCTTACAACAGTGTTC TTTCCACTCATTCTCTTCTTGAGCACACTGATGTAGTTGTACTTTTGGACAATGAGGCAATATATGATATCTGCAGAAGA TCATTAGATATAGAAAGGCCAACTTACACCAACTTGAATCGTCTAATTTCTCAAGTTATCTCTTCCTTGACCACATCCTT GAGATTCGATGGCGCAATTAACGTGGACGTTACTGAGTTTCAGACTAACCTGGTACCATATCCCCGTATCCATTTCATGC TTTCATCGTATGCTCCTGTGATATCTGCTGCGAAGGCCTACCATGAACAGATATCGATTCCTGAGATCACCAGTGCTGTT TTTGAGCCATCAAATATGATGGCTAAGTGTGATCCAAGACACGGGAAGTACATGGCGTGTTGCCTTATGTATCGTGGAGA TGTTGTGCCCAAAGATGTCAATGCAGCTGTTGCAAATATCAAGACGAAGCGAACAGTTCAGTTTGTTGACTGGTAATTAT ACTTCCTTTGGAATGTCATAATATGAGCAATTTTAAATTAGATTATGTTCCTTTACTAATAGTTGTATGCTCTATTGTGA TTCTAACTACTTATACTCTACTATTAATTTATAGTTCTTTCTATATTAGTATTTGTTTTGATTAATCATGCAAAAATACT AGTTTGCTAATGATTGAACGATTTTGATGAATAATTTCAGGTGTCCTACTGGTTTCAAGTGTGGAATCAACTACCAGCCT CCAACAGTGGTACCAGCAGGTGATCTTGCCAAGGTGCAGCGCGCAGTTTGTATGATCAGCAACAACACTGCTGTTGCTGA AGTCTTCTCTCGCATTGATTATAAGTTCGATCTCATGTACTCTAAGCGGGCATTTGTCCACTGGTATGTGGGTGAAGGAA TGGAAGAAGGTGAATTCTCAGAAGCCCGGGAGGATCTCGCTGCTCTCGAAAAGGATTATGAAGAAGTTGGAGCTGAAGGT GAAGAGGGTGAAGAAGATGAAGAAGGTTATTGAGAATAGTCAATCCATAACTTACATCTCCATTCTTTAATATGTGGTGT ATCTTTGGGTGTGCAATGACTTCCCTTGTCCATTGTTTTAAGCATCTTTCTGTTGTGTGCTAGCTTTGTTCTGATGACTG TTTCAAGTCAAAAGGCGCGATACAATTCTTTTCCTCATGAATAAGGGTGGTAAATGTAATTTCGAATCACTTGCTTTGTT TCTGTGTAGAGCAAAAAAATTGGCTGGCTAGGAATGCTGCAAATTTCCATTATTTAAAAAGAAAATAGATATTTTCTTAT CTTTTGCAATAGTAATATACTAGTATGCTTATATAAACTGGCTGCTGTATTTTCTGCAAGTGAAGGGTAATAAGGATTAG TTTACCGATAAACTACAATAGTGTTTGTAAAAAACTCAAAATGGTACTGTATTTAGGTGCAACATGTCTAGTGCATCATC ATTTCCCACCCTCCTAATGGTGATCAGCAGAAATCATGCATTACAAAACCATGAATAGTTGTTTGAGG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0643600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGGGAGGTCATAAGTATTCATATTGGACAAGCTGGAATTCAAGTGGGGAATTCATGTTGGGAGCTGTATTGCCTTGA GCATGGAATTCAACCTGATGGCATGATGCCAAGTGATACCTCAGTTGGCATTTCAAATGATGCTTTTAACACCTTCTTCA GTGAAACGGGTTCCGGTAAGCATGTGCCGAGGGCTTTATTTGTTGATCTAGAACCTAGTGTTATTGATGAAGTAAGAACT GGTGAGTACAGACAACTCTTTCACCCTGAGCAGTTGATCTCTGGCAAGGAAGATGCTGCTAATAATTTTGCAAGGGGACA CTATACTGTTGGAAGAGAAATTGTTGAACTATGCCTTGACCGGATCCGAAAATTAGCGGATAATTGCACTGGTTTGCAAG GATTCTTGGTTTTCAATGCTGTCGGTGGTGGTACCGGTTCTGGTTTGGGATCATTACTTTTGGAACGGTTGTCTGTGGAT TATGGGAAGAAGTCTAAACTTGGCTTTACCATCTATCCCTCTCCTCAGGTATCTACTGCAGTTGTTGAACCTTACAACAG TGTTCTTTCCACTCATTCTCTTCTTGAGCACACTGATGTAGTTGTACTTTTGGACAATGAGGCAATATATGATATCTGCA GAAGATCATTAGATATAGAAAGGCCAACTTACACCAACTTGAATCGTCTAATTTCTCAAGTTATCTCTTCCTTGACCACA TCCTTGAGATTCGATGGCGCAATTAACGTGGACGTTACTGAGTTTCAGACTAACCTGGTACCATATCCCCGTATCCATTT CATGCTTTCATCGTATGCTCCTGTGATATCTGCTGCGAAGGCCTACCATGAACAGATATCGATTCCTGAGATCACCAGTG CTGTTTTTGAGCCATCAAATATGATGGCTAAGTGTGATCCAAGACACGGGAAGTACATGGCGTGTTGCCTTATGTATCGT GGAGATGTTGTGCCCAAAGATGTCAATGCAGCTGTTGCAAATATCAAGACGAAGCGAACAGTTCAGTTTGTTGACTGGTG TCCTACTGGTTTCAAGTGTGGAATCAACTACCAGCCTCCAACAGTGGTACCAGCAGGTGATCTTGCCAAGGTGCAGCGCG CAGTTTGTATGATCAGCAACAACACTGCTGTTGCTGAAGTCTTCTCTCGCATTGATTATAAGTTCGATCTCATGTACTCT AAGCGGGCATTTGTCCACTGGTATGTGGGTGAAGGAATGGAAGAAGGTGAATTCTCAGAAGCCCGGGAGGATCTCGCTGC TCTCGAAAAGGATTATGAAGAAGTTGGAGCTGAAGGTGAAGAGGGTGAAGAAGATGAAGAAGGTTATTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0643600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGKHVPRALFVDLEPSVIDEVRT GEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHGKYMACCLMYR GDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYS KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEEGEEDEEGY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF52490
1 244 244 8.77E-98
IPR036525
PANTHER
PTHR11588:SF333
1 447 447 1.5E-300 –
PANTHER
PTHR11588
1 447 447 1.5E-300
IPR000217
Gene3D
G3DSA:3.40.50.1440
1 268 268 1.6E-125
IPR036525
CDD
cd02186
2 432 431 0.0 –
Pfam
PF00091
3 213 211 3.3E-68
IPR003008
PRINTS
PR01161
10 30 21 9.9E-90
IPR000217
PRINTS
PR01162
18 33 16 3.4E-115
IPR002452
PRINTS
PR01162
45 58 14 3.4E-115
IPR002452
SMART
SM00864
49 246 198 1.7E-72
IPR003008
PRINTS
PR01161
53 72 20 9.9E-90
IPR000217
PRINTS
PR01162
88 101 14 3.4E-115
IPR002452
PRINTS
PR01161
95 106 12 9.9E-90
IPR000217
PRINTS
PR01161
108 132 25 9.9E-90
IPR000217
PRINTS
PR01162
120 128 9 3.4E-115
IPR002452
PRINTS
PR01161
134 152 19 9.9E-90
IPR000217
ProSitePatterns
PS00227
142 148 7 -
IPR017975
PRINTS
PR01162
148 160 13 3.4E-115
IPR002452
PRINTS
PR01161
153 174 22 9.9E-90
IPR000217
PRINTS
PR01162
161 172 12 3.4E-115
IPR002452
PRINTS
PR01161
178 191 14 9.9E-90
IPR000217
PRINTS
PR01161
192 212 21 9.9E-90
IPR000217
PRINTS
PR01162
214 226 13 3.4E-115
IPR002452
SUPERFAMILY
SSF55307
246 435 190 2.72E-84
IPR008280
SMART
SM00865
248 393 146 2.5E-51
IPR018316
Pfam
PF03953
263 392 130 2.6E-51
IPR018316
Gene3D
G3DSA:3.30.1330.20
269 383 115 6.4E-64
IPR037103
PRINTS
PR01162
274 289 16 3.4E-115
IPR002452
PRINTS
PR01162
321 342 22 3.4E-115
IPR002452
PRINTS
PR01162
347 360 14 3.4E-115
IPR002452
PRINTS
PR01162
360 379 20 3.4E-115
IPR002452
PRINTS
PR01161
380 408 29 9.9E-90
IPR000217
Gene3D
G3DSA:1.10.287.600
384 437 54 1.5E-32
IPR023123
PRINTS
PR01162
385 401 17 3.4E-115
IPR002452
Coils
Coil
418 445 28 - –
PRINTS
PR01162
422 438 17 3.4E-115
IPR002452

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005200
Molecular function Structural constituent of cytoskeleton The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of
GO:0005874
Cellular component Microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
Subterm of
Part of
GO:0007017
Biological process Microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0643600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…