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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004148
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.791s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3137870.1
n.a. PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3-like [Glycine max] gi|356523716|ref|XP_003530481.1| chr1 35745154 35754140 +
2 domain predictions
2 GO terms
Lj3g3v3500220.1
n.a. PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD2-like [Glycine max] gi|356544659|ref|XP_003540765.1| chr3 42585629 42595505 -
2 domain predictions
2 GO terms
LotjaGi1g1v0333600.1
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|I1JXQ4|I1JXQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333600 LjG1.1_chr1 79188440 79196953 +
2 domain predictions
2 GO terms
LotjaGi1g1v0528600.1
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr|A0A151TCR5|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600 LjG1.1_chr1 105531447 105542646 +
2 domain predictions
2 GO terms
LotjaGi1g1v0528600.2
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr|A0A151TCR5|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600 LjG1.1_chr1 105533038 105540681 +
2 domain predictions
2 GO terms
LotjaGi1g1v0629500.1
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|V7CU24|V7CU24_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0629500 LjG1.1_chr1 118077009 118084246 +
2 domain predictions
2 GO terms
LotjaGi1g1v0629500.3
n.a. Hydroxyproline-rich glycoprotein family protein; TAIR: AT2G33490.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490; TrEMBL-Plants: tr|A0A0L9U6Q1|A0A0L9U6Q1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0629500 LjG1.1_chr1 118077060 118084192 +
2 domain predictions
2 GO terms
LotjaGi3g1v0524900.1
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT1G60860.1 ARF-GAP domain 2; Swiss-Prot: sp|Q9C6C3|AGD2_ARATH ADP-ribosylation factor GTPase-activating protein AGD2; TrEMBL-Plants: tr|K7LSS6|K7LSS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524900 LjG1.1_chr3 94168287 94180100 -
2 domain predictions
2 GO terms
LotjaGi4g1v0421700.3
n.a. ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G61980.1 ARF-GAP domain 1; Swiss-Prot: sp|Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1; TrEMBL-Plants: tr|G7LIT7|G7LIT7_MEDTR ADP-ribosylation factor GTPase-activating protein AGD10; Found in the gene: LotjaGi4g1v0421700 LjG1.1_chr4 79690415 79699454 -
2 domain predictions
2 GO terms