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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3137870 |
| Transcript ID | Lj1g3v3137870.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3-like [Glycine max] gi|356523716|ref|XP_003530481.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 6 | 232 | 227 | 2.00E-40 | – | |
| SUPERFAMILY | 6 | 241 | 236 | 2.93E-63 | – | |
| SMART | 11 | 218 | 208 | 8.10E-16 | ||
| Gene3D | 12 | 229 | 218 | 1.10E-48 | ||
| CDD | 14 | 215 | 202 | 8.12E-116 | – | |
| PANTHER | 165 | 332 | 168 | 0 | – | |
| PANTHER | 165 | 332 | 168 | 0 | – | |
| Coils | 227 | 247 | 21 | – | – | |
| Gene3D | 239 | 437 | 199 | 1.40E-24 | ||
| MobiDBLite | 249 | 270 | 22 | – | – | |
| SUPERFAMILY | 290 | 315 | 26 | 2.93E-63 | – | |
| ProSiteProfiles | 292 | 432 | 141 | 16.298 | ||
| SMART | 293 | 434 | 142 | 4.60E-20 | ||
| SUPERFAMILY | 293 | 333 | 41 | 1.23E-22 | ||
| Pfam | 294 | 431 | 138 | 1.70E-11 | ||
| CDD | 295 | 436 | 142 | 4.01E-37 | – | |
| SUPERFAMILY | 377 | 448 | 72 | 1.23E-22 | ||
| PANTHER | 378 | 459 | 82 | 0 | – | |
| PANTHER | 378 | 459 | 82 | 0 | – | |
| MobiDBLite | 442 | 469 | 28 | – | – | |
| PANTHER | 495 | 595 | 101 | 0 | – | |
| PANTHER | 495 | 595 | 101 | 0 | – | |
| SMART | 503 | 648 | 146 | 6.80E-39 | ||
| ProSiteProfiles | 503 | 648 | 146 | 27.569 | ||
| SUPERFAMILY | 503 | 643 | 141 | 4.84E-37 | – | |
| Pfam | 506 | 642 | 137 | 9.50E-34 | ||
| PRINTS | 515 | 534 | 20 | 7.10E-16 | ||
| PRINTS | 534 | 551 | 18 | 7.10E-16 | ||
| PRINTS | 557 | 578 | 22 | 7.10E-16 | ||
| PANTHER | 615 | 688 | 74 | 0 | – | |
| PANTHER | 615 | 688 | 74 | 0 | – | |
| Gene3D | 656 | 683 | 28 | 3.60E-26 | ||
| SUPERFAMILY | 667 | 821 | 155 | 3.73E-25 | ||
| PANTHER | 738 | 821 | 84 | 0 | – | |
| CDD | 738 | 823 | 86 | 7.81E-27 | – | |
| Gene3D | 738 | 819 | 82 | 3.60E-26 | ||
| PANTHER | 738 | 821 | 84 | 0 | – | |
| ProSiteProfiles | 740 | 830 | 91 | 29.706 | ||
| ProSiteProfiles | 740 | 772 | 33 | 14.506 | ||
| SMART | 740 | 769 | 30 | 1.10E-07 | ||
| Pfam | 743 | 794 | 52 | 7.90E-11 | – | |
| SMART | 773 | 802 | 30 | 0.016 | ||
| ProSiteProfiles | 773 | 805 | 33 | 12.129 | ||
| MobiDBLite | 800 | 830 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
Expression pattern of Lj1g3v3137870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3137870.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.