Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0528600.2

Overview

Field Value
Gene ID LotjaGi1g1v0528600
Transcript ID LotjaGi1g1v0528600.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr|A0A151TCR5|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:105533038..105540681) extracted from Lotus japonicus Gifu genome v1.2.

TGCTGTTTCGCATTCATCAAAGATGCTAGTCATTTACTTCTTTCCCCCCTTCGATTTTACAATGAAGTCATTTTCAGTTA TCGTATTGATGAGTTCTTTCTTGTCTGACTTGCTGGATACATGCTAACTGTTGAAGTTATATTCTAACACAAATGTTGTT TCTCTTTTAATTCTTTGTGGAACAGATACAATGCATGGAGGAAAGTGCTGAATCTTTGAGAGAGAGAAGTTTAAAATTTT ACAAAGGATGTAGAAAATACACGTATGTAGTTATTTGATTCAAATTACTATCGGCCCCTACTGATAAATAGCCATGAACA TTTGAGAACATGTTCAATTGCTCACACATTATCTCCTGTCCTTGTTTTTGTGGAAGCATATGTGCTTTTATTCTTTAAGT TATATGTCTATCTTCTTTTCAATTGTTGTTTGTTATTTCTGATTAGCTTATCGTATAGTCTTTGTTGTCTAGGCCACTTT ATGCTGTATGTTTCCTTCATGCCCTTATTCTATAAGCTACACAATCAGCTTCAAGCATATTGTTTTTGAAATAGAAAATT AGTTTTATTATCAAGAGTGCAGAAGAGGTAAAAGAAGAGGGTGAGATGTCCTTCTTGACAGTTGCACTGCCACTGCATAA GTTGCAGCAAAATTAATCAAGATTATTTGTTTAATAAATCATCCTAAATAGAGCTCGATTAGATGATTCAGATGCAGAAT ACTTAGGTGCAGCATAATTAAACACCGCAATATATTTTTTTGCATATATGAGCTTCCTTTTTGTTCTCTTGAAAATCTGG GAGTTCTCAGATCTAGGGTTAGTGTAGCCCTTTCTAGACAAAAGATAGAACCTATCTTAGTGTCTTATTAAGTCTTGGGT CTCGCCACACTTCCTCCAGGAACCCTGGCATAGGGCGCGGCGCCCTATACCAGTCCAATGCCCACAAGATGCCGAATCCG AGGCACGGGGATGAAGTGCGTCTTTATTTGCCTTCGCCTGTCTTTTGTGTCCTTGGCATAGGGCATGGCACCCTACTCCA GTCCACTTTTCAACCAAAAACAAGCATAAACTGCGCAGCAATATCCCAACAGATCATTGGTGTTATTTTGTTAGCTATTC TTTTGAGCCTTTCTTTTTAAAGAATCCTCTGATTTTAATCATTGAGAAATATTATTCTTGAGCAAATATGGTACAGAATT TTAATGAAAAATCTAATAGGTTTTACGAGGGGAAAAAATTCTTATACTGCTTAATAGTTGTGTTAGATTACTATATCCTC CATGTGAGATGCCTCTTGATGATTCTGTAGAGCCATCCCAACATCCATCATCCAAAGGAAAAACTTTAGTGGGTTCACTT TCTGTTCTTATAGTTTCATTGTTAGAAGTTTCTCATAGCTCATCATGTTGAATATTATTTTTGAAGAATACTTTCACACG TCTATACTTTCCAGTGAAGGACTTGGGGAGGCATATGATGGAGATATTGCATTTGCAAGTTCCCTAGAAACTTTTGGTGG TGGGCATAATGATCCAATCAGTGTGGCCTTCGGAGGTATGCCATTTTTTTTCTAATCTTCATTCTTATAATGGTCGATGA GATGTTTGTTCTCAATTGCTTCTGGTAGTTGATAAACTGTCCATCATAAAAATTATGACTTCTAAATTCTAATACTTGAC AATGTTATTATCTTTGACTCTAAAGTGTCAACAATAATGAAATAATTTCTGATTTTGTTTCTGTCTTCACTTCAGGCCCT GTTATGACCAAATTTACCATAGCCTTAAGAGAAATTGGGACATACAAGGAAGTCCTTCGGTCACAGGTAAAACATTGTGT TGCTGGTTCTTTTTAAGTATAGCAATCAATTGTTGGGTCTAGTCAACATAGGTCAAACTGTCAAAGCATAAAACTTGAAA GCTGACTCCCATTACGACCTTTAGCAGTTGGCTATTTGGAAGTATCATCCTGGTTTTTTGGTTTTTTTTGCCTTTGCCCA TCAGTTCTTTGTGATAGTTTCTGCTATACTGTTAATATAGATTGCTTTCGTCATTTCAGGTTGAGCACATGTTAAATGAC AGATTGCTTCAGTTTGTCAATATTGATTTGCAAGAGGTCAAGGTACTTTCTGTTAAAAGAAGAAAAAAATTGTCATGATA TTTTCTTTTTACCCTGTCACTTAGATGTGCACCAAACGGAAGGGAGCTGATCAAACCTTTTTTTAATATGACTGCATTTC TCTAGAGTGGTAGGCTCTTTTAAGTGACTTCTCTCTTGGTTGACTTCTGTTTCTTTGTTTAGGTTTAAGGTTTAGGATAC AAGCACAAATTATCTGAAACATATAGTGCGCATGTGAAAAGAGTAGTACTATAGTATATATTTTTATTAGATTCTATAAA AAAATCATGGACAGATGTCTCTCCTATATAGCTTGTCAAAGTTCTTATGTCCACATTAAAGTAGCTTATGATTTGTCTTC GTCTTGTTGAGAAGCAAATGAGAGCACAAGATAAGGCATTTGCACATCTCTATATTTTGATCTGACTTTTTATTTTTTAA TGTTAGGTTTTTCATTATTTTCCTTTGTACATGCATGTGTAGCCCCTCCTTTGTTTCCATAATATATATGAGCTATATTT CTCTCTCATTTCTCCAAAGTAGGTTGCATATTCCTTGTTAAGATTTTGAGTGTGATTATTGGAATCTTTTTAAACTTTAT AGCTTTAATATGGTTTTGGTTATGTGGACTTTGAACCTCACCTAATAATGAGGAGAATTGATGTTTAATTTAGAATATTA AGATTTCAGTATGCTCGTAGTTTCTGTTCTAAGGGGTCCTCTCTTAGTGTAGGAAGCACGGAAGCGCTTTGACAAAGCTA GCCTTATTTATGACCAGGTGCATTCCCAATCACTTACTTTTCTAATTTTCTGATGTATGGTGTATTCTTTCTGCTTTAGA AATTTGGATGCAAAGCATTCTGCCTACAATAATGTGAGGAAGGAGATCAATGGATTTAACAAATTAAATATTATTCTGAA TTTCAGATGAACCAATTTAAACCAAAAGTACTAGAAACTACAAAATAAGTTTATCTAATGGTTAGCAATTTGCTAATTTT TGCAGACTCGTGAAAAGTTTCTATCACTGAGAAAAGGCACAAAAACTGATGTAGCTACTGCTCTTGAAGAGGTTGGCTTT TGCATGTCTTATATGTTGGGTCACCTTACTGTTTTATTCCATTCTTGAAAGCTTTAAATTATTGGGAAATATTTCAGGAG CTTCATAGTTCAAGATCTACATTTGAGCAAGCTCGGTTTAATCTGGTTTGTAAATTCATTTGATCAAAACTATAGAAATA GTTAGTGTTAGATGGCATTTGTTTTTCACAAATAAACATGAAGAGTCTCTGTCTAGGTTACTGCCTTGTCAAATGTTGAA GCAAAGAAGAGATTTGAATTTTTGGAAGCAGTGAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGTAGAAAT ATTGTCAAGTTATTCTTTCCCACATTTTTGTTACAACATGCTTATTATCTTCAATTATTTTCACTTGTAGGGTTATGAAT TGTTGCACCAAATGGAGCCATATATTAACCAGGTCTGGAGTCAGCTTTATCTTTAAACCCCTCTTTTTATATATATGGAA GTTTGTCATTGATAAAAGTTTTATCAAGTGGTACATCAAGGGTGGTTAATTGGCAAACAGTTGAGCCGGAATGAATTTAA GCCAGGCTAGTTATTTTGCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCAAATTATGAACAAGCAGCTCTCAA TGAAAGAATGCAGGATTACAAACGGCAGATTGATCGAGAGAGTAGATGGGCTTCAAATGGTTCTAATGGGTCTCCTAATG GAGATGGTATACAAGCTATTGGTAGAAGTTCACATAAAATGATAGAGGCAGTCATGCAATCTGCTGCAAAGGGAAAGGTT GAAAAGTTGCCTGGGGATTGTTGATTAAAGTTACTAGTTATTACTTTCTCCCAATGGTTTTGTTTTATAATTTTTTTTTT TCATTTTTGTCATTTTAGGTTCAAACTATTCGACAAGGTTATCTCTCAAAGCGTTCCTCAAACTTAAGGGGAGACTGGAA AAGGAGGTTTTTCGTTCTTGATAGCCGGGGAATGCTGTATTACTACCGTAAACAAGTCGGCAAATCATCTGTAAGAAGTC TAATGTGAAAAATAAGTTGGTTTATGAAGGAATCAACCTAGTGTGCTTCTTCATAACGAATTTCACCATATAGTAATGTG ATTATTTATAATGTGTAGGGGTCTAGTACTCAGCACTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGTATTTTAAG TCGATGGCTATCTTCTTCTCATCACCATCATCATCATGGTGGCGTACATGATGAGAAATCTGTTGCTCATCACACTGTGA ACCTGCTTACATCAACAATCAAAGTTGATGCCGACCAATCAGATTTGCGTTTTTGCTTCAGGATCATTTCACCAACAAAG AACTATACTTTGCAGGTTATTTGATATGATCATTGTATCTTTTGTATTCATAAAGAGATGGTGATTAAGGCTTTATAGGT TCATTCCTTAATTATGCTTGTCAGTGCAGGCAGAAAGTGCACTGGACCAAATGGATTGGATTGAAAAGATCACAGGGGTT ATTGCCTCGTTGTTGAGTTCTCAGATTCCTGAAAGGGTAACTTGCTAGAACTTTTCCTTTCCATGCAGTGACAGTTTCAG TTGATTTGATTAATGTTACCCCTTCCTTTTTACCAGATGTTACCTGCAAGTCCAATGGGAAGCGGTCATAATCGGTCTAC CAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTCGACCACACAACTGTTGAAGAATATGCTGATAGAAGTTTTGCTTCTG CGCATATGGAGCGCCCCTCAAGAAGTATGCACCAGCAGCGGTCCTGTACTAAAAGTGAGAAGCCCATTGATGTGTTGCGA AAAGTTATTGGAAATGACAAATGTGCTGATTGTGGTGCTCCTGAACCTGATTGGGCATCTCTAAATCTTGGTGTTCTTGT TTGTATTGAGTGTTCTGGTGTTCATCGAAACCTAGGTGTTCACATATCAAAGGTAGATTGCCTTGATCCTTGTTCATGTT ATATCTGCAAATCATTTGTTTTCTTTTAAACATTATTTGTAATGATGCTTGACAATGAACATAGACCAATAACATAAAAG GAAAAAAGAATTGATATAAATTGTTTAGCTCGAAACTATTGGTTATCCTTATGAAATATCTCTCACTAAAGAACAATTCG TTGCTTAGTTTTCTCTCTATTTTTTTCTTGTATCTTGTTCTGTTAGGAGGGTTTCAATTCTCCAGTTTTTCATTTCTCTT CTCTTCTGATAAATTGAACTTTGTAATAAACTACACTGCGCAATATTAAGTGCAACCAACTGCATAAGTGCCTTTTTCAT ACAGTGACTTATATGTTAAGATTGTGATGAAGATTACAGTTGAAGCTCTTAGAAGTTTGTGTGCTATTTGTAATATAGGA AATAATTATTTTGCTGTACTGCAGTGTTGGTGACACTGTATTTATTGTTGAGAAATATTTTCACATTCAAATTGGTTAAT TATAGGAAATTTCTGATTGAAAATGTATGAATATTTTCATGAATAATCACGTTTTACTGTACATTAGTAATTTCAGAAAA AAATATCTAGTTCGGCACTGTGTAAACTACTGCCTGTGGGGCTGTGCCTGGTTGCGTTCCTTTCCCCTCACTTTATATTT AGGTTTCCACTGTTGCTTCTATTTGGTGATGAGGCTTCCATAGATTGATCATCTAGCTCGTTTCTCTAACTTCTGTTGCA GGTCAGATCTCTCACATTGGATGTGAAAGTGTGGGAACCTTCTGTAATAAGTTTGTTTCAGTCTCTTGGGAATACTTTTG CTAACTCTGTCTGGGAGGAACTATTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCTCTACAGGGTAAATAATCCCC AATATTATATCTTTGCATTAGACTTATTGTTATATTTATTATTTGACCTAGTGTTGCTAATATTCACTTCTACTGATTAT GAAGCTTTAGCAAGTCTGATAAACAAATGATGCTTTTCATCACCAAACCTAGTCAATCTGATTCTCTCTCTGTCAAGGAA AAGTTCATCCATGCAAAGGTATGTGCTATAATATGCTTGTACTCAAATCTTACTAGTATAAAAAACCTGTGAAAGTTACT TAGGTATTTGTTAATGGGCCAGCTAATGATGAGACCCAAATAGACTGAAGTGTCTGGTAGTACAGTTAGATGTTGGTTAC GACCTTGTTAGTATGGTTAGTTTGGAAGTTGTTTGAAGCTGTTAGAAGTTTTGATTTTGAACTAATTTAAAGTACTGTTG CCAAGAACAGAGTAATAGCATTTTATGCTAACGTCGTATGGGTTGCTCCGATTTGTCTGCTGGTTGACATTTGGAACTAA ATTCTGTAACTGGATAGTGTTGTTGGAGGACGTATTTGTGTGAATACTTCATTTTTCATAAATACTTTATTAAACAAGAT TAGCAGGGGTTGGCATGTTCTTTTTATCACCTTTTAAGATTCCCTGAAGTGGTATGAGTGGGGTGGTGACCACGTGAATG AGTCTATGGATAATGATTACTTTGTATGCTCCATAGCATATCTGTTCGCGTGTTGGACCATAAGCTCAAACACCAGGAGA TGTATTTATAATGTTATTATGTTAACTGTACTTATATGTTTACTTGTTTTTAATACTATGGAGCCTTTTGTGCTACCTTC TAAGTGCTGCAATTCAGACTCCCTGGTTCATTTCTTTTAATGGCAGTATGCTGAGAAGATTTTTGTTCGCAAGCCCAAGG ACAATCAATACCGTCTCCTGGTGGCGCAGCAGATCTGGGAGGCTGTTCGTGCTAACGACAAAAAAGCTGTATACCGCTAC ATTGTTCACTCTGACATTGATGTTAATGCTGTTTATGAGCAAACTGGCTCCAACTCTTTAACCCTTGCCAAAGTAATGCT ATTACAAGAGCAGACAAGCCTTGATCGCAGCTCTAGTTTAGCGGGAAACGCATTGGACTGGTCCTCTAATAACCATTTGA GTTCGGTGGGTGCGAAAGAAGGGCAGGCCATGGATAATCTAGATGGGTGCACACTACTTCACCTTGCTTGTGAAACCGGA GACATTGGCATGTTGGAGCTCCTCCTACAATATGGTGCAAATGTTAATGCAACTGATTCGAGAGGTCAAACACCACTACA TCGCTGTATTCTCAAAGGAAAATCTATACTTGCTAGATTACTGTTATCAAGGTGAGCCTAATGTACTTCTTCTTATGGTT TATCTGATTCTTCCAACAATTTATTTGGTTCTTTGTTTTTTATCATTTGGTTTTTAGCCATGGCTCACTGAATACTACTG AAATCTGTAAAAATGCAGGGGGGCCGATCCTCGAGCTGTGGATGACCAGGGAAGAACCCCTATTGAGCTTGCTGCAGAAT CAAATGCTGATGACCATGCTCCATTGGCTGATTCTAATGGATGA 

CDS sequence (LotjaGi1g1v0528600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTAGTCATTTACTTCTTTCCCCCCTTCGATTTTACAATGAAGTCATTTTCAATACAATGCATGGAGGAAAGTGCTGA ATCTTTGAGAGAGAGAAGTTTAAAATTTTACAAAGGATGTAGAAAATACACTGAAGGACTTGGGGAGGCATATGATGGAG ATATTGCATTTGCAAGTTCCCTAGAAACTTTTGGTGGTGGGCATAATGATCCAATCAGTGTGGCCTTCGGAGGCCCTGTT ATGACCAAATTTACCATAGCCTTAAGAGAAATTGGGACATACAAGGAAGTCCTTCGGTCACAGGTTGAGCACATGTTAAA TGACAGATTGCTTCAGTTTGTCAATATTGATTTGCAAGAGGTCAAGGAAGCACGGAAGCGCTTTGACAAAGCTAGCCTTA TTTATGACCAGACTCGTGAAAAGTTTCTATCACTGAGAAAAGGCACAAAAACTGATGTAGCTACTGCTCTTGAAGAGGAG CTTCATAGTTCAAGATCTACATTTGAGCAAGCTCGGTTTAATCTGGTTACTGCCTTGTCAAATGTTGAAGCAAAGAAGAG ATTTGAATTTTTGGAAGCAGTGAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGTTATGAATTGTTGCACC AAATGGAGCCATATATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCAAATTATGAACAAGCAGCTCTC AATGAAAGAATGCAGGATTACAAACGGCAGATTGATCGAGAGAGTAGATGGGCTTCAAATGGTTCTAATGGGTCTCCTAA TGGAGATGGTATACAAGCTATTGGTAGAAGTTCACATAAAATGATAGAGGCAGTCATGCAATCTGCTGCAAAGGGAAAGG TTCAAACTATTCGACAAGGTTATCTCTCAAAGCGTTCCTCAAACTTAAGGGGAGACTGGAAAAGGAGGTTTTTCGTTCTT GATAGCCGGGGAATGCTGTATTACTACCGTAAACAAGTCGGCAAATCATCTGGGTCTAGTACTCAGCACTCTGGTCAGAG GAATAGTTCTGAGCTTGGTTCTGGTATTTTAAGTCGATGGCTATCTTCTTCTCATCACCATCATCATCATGGTGGCGTAC ATGATGAGAAATCTGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCCGACCAATCAGATTTG CGTTTTTGCTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAAAGTGCACTGGACCAAATGGATTGGAT TGAAAAGATCACAGGGGTTATTGCCTCGTTGTTGAGTTCTCAGATTCCTGAAAGGATGTTACCTGCAAGTCCAATGGGAA GCGGTCATAATCGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTCGACCACACAACTGTTGAAGAATATGCT GATAGAAGTTTTGCTTCTGCGCATATGGAGCGCCCCTCAAGAAGTATGCACCAGCAGCGGTCCTGTACTAAAAGTGAGAA GCCCATTGATGTGTTGCGAAAAGTTATTGGAAATGACAAATGTGCTGATTGTGGTGCTCCTGAACCTGATTGGGCATCTC TAAATCTTGGTGTTCTTGTTTGTATTGAGTGTTCTGGTGTTCATCGAAACCTAGGTGTTCACATATCAAAGGTCAGATCT CTCACATTGGATGTGAAAGTGTGGGAACCTTCTGTAATAAGTTTGTTTCAGTCTCTTGGGAATACTTTTGCTAACTCTGT CTGGGAGGAACTATTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCTCTACAGGCTTTAGCAAGTCTGATAAACAAA TGATGCTTTTCATCACCAAACCTAGTCAATCTGATTCTCTCTCTGTCAAGGAAAAGTTCATCCATGCAAAGTATGCTGAG AAGATTTTTGTTCGCAAGCCCAAGGACAATCAATACCGTCTCCTGGTGGCGCAGCAGATCTGGGAGGCTGTTCGTGCTAA CGACAAAAAAGCTGTATACCGCTACATTGTTCACTCTGACATTGATGTTAATGCTGTTTATGAGCAAACTGGCTCCAACT CTTTAACCCTTGCCAAAGTAATGCTATTACAAGAGCAGACAAGCCTTGATCGCAGCTCTAGTTTAGCGGGAAACGCATTG GACTGGTCCTCTAATAACCATTTGAGTTCGGTGGGTGCGAAAGAAGGGCAGGCCATGGATAATCTAGATGGGTGCACACT ACTTCACCTTGCTTGTGAAACCGGAGACATTGGCATGTTGGAGCTCCTCCTACAATATGGTGCAAATGTTAATGCAACTG ATTCGAGAGGTCAAACACCACTACATCGCTGTATTCTCAAAGGAAAATCTATACTTGCTAGATTACTGTTATCAAGGGGG GCCGATCCTCGAGCTGTGGATGACCAGGGAAGAACCCCTATTGAGCTTGCTGCAGAATCAAATGCTGATGACCATGCTCC ATTGGCTGATTCTAATGGATGA 

Protein sequence (LotjaGi1g1v0528600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLVIYFFPPFDFTMKSFSIQCMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASSLETFGGGHNDPISVAFGGPV MTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTREKFLSLRKGTKTDVATALEEE LHSSRSTFEQARFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAAL NERMQDYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVL DSRGMLYYYRKQVGKSSGSSTQHSGQRNSSELGSGILSRWLSSSHHHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDL RFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERMLPASPMGSGHNRSTSESSSFESSDFDHTTVEEYA DRSFASAHMERPSRSMHQQRSCTKSEKPIDVLRKVIGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRS LTLDVKVWEPSVISLFQSLGNTFANSVWEELLQSRSAFQVDLVSTGFSKSDKQMMLFITKPSQSDSLSVKEKFIHAKYAE KIFVRKPKDNQYRLLVAQQIWEAVRANDKKAVYRYIVHSDIDVNAVYEQTGSNSLTLAKVMLLQEQTSLDRSSSLAGNAL DWSSNNHLSSVGAKEGQAMDNLDGCTLLHLACETGDIGMLELLLQYGANVNATDSRGQTPLHRCILKGKSILARLLLSRG ADPRAVDDQGRTPIELAAESNADDHAPLADSNG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART 11 221 211 4.0E-15
PANTHER 14 829 816 0.0
PANTHER 14 829 816 0.0
Gene3D 17 254 238 1.0E-61
Pfam 18 236 219 1.6E-34
SUPERFAMILY 19 318 300 2.3E-57
CDD 19 218 200 1.08658E-116
Coils 230 250 21 -
MobiDBLite 252 273 22 -
MobiDBLite 256 272 17 -
ProSiteProfiles 295 435 141 16.298
SMART 296 437 142 4.2E-20
SUPERFAMILY 296 451 156 1.33E-22
Pfam 297 434 138 1.5E-11
CDD 298 439 142 6.52607E-38
MobiDBLite 445 472 28 -
MobiDBLite 453 470 18 -
Gene3D 486 650 165 1.4E-41
SUPERFAMILY 506 646 141 4.97E-37
ProSiteProfiles 506 651 146 27.569
SMART 506 651 146 6.8E-39
Pfam 509 646 138 9.5E-34
CDD 509 638 130 3.06866E-53
PRINTS 518 537 20 7.2E-16
PRINTS 537 554 18 7.2E-16
PRINTS 560 581 22 7.2E-16
Gene3D 651 828 178 6.2E-29
SUPERFAMILY 670 824 155 3.89E-25
ProSiteProfiles 743 833 91 29.706
ProSiteProfiles 743 775 33 14.506
SMART 743 772 30 1.1E-7
Pfam 763 817 55 8.7E-11
SMART 776 805 30 0.016
ProSiteProfiles 776 808 33 12.129
MobiDBLite 803 833 31 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function GTPase activator activity Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0528600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…