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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3339020 |
| Transcript ID | Lj2g3v3339020.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Auxin-induced in root cultures protein [Medicago truncatula] gi|357495381|ref|XP_003617979.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 20 | 20 | – | – | |
| PIRSF | 1 | 400 | 400 | 3.20E-145 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 213 | 193 | – | – | |
| PANTHER | 27 | 395 | 369 | 1.10E-260 | – | |
| PANTHER | 27 | 395 | 369 | 1.10E-260 | – | |
| CDD | 32 | 198 | 167 | 1.09E-56 | – | |
| ProSiteProfiles | 41 | 170 | 130 | 16.108 | ||
| Pfam | 82 | 195 | 114 | 6.30E-20 | ||
| ProSiteProfiles | 177 | 377 | 201 | 32.353 | ||
| CDD | 188 | 370 | 183 | 1.61E-46 | – | |
| Phobius | 214 | 235 | 22 | – | – | |
| SMART | 215 | 340 | 126 | 3.90E-33 | ||
| TMHMM | 221 | 238 | 18 | – | – | |
| Phobius | 236 | 246 | 11 | – | – | |
| Pfam | 245 | 340 | 96 | 5.00E-07 | ||
| Phobius | 247 | 269 | 23 | – | – | |
| TMHMM | 251 | 273 | 23 | – | – | |
| Phobius | 270 | 288 | 19 | – | – | |
| TMHMM | 288 | 305 | 18 | – | – | |
| Phobius | 289 | 307 | 19 | – | – | |
| Phobius | 308 | 318 | 11 | – | – | |
| TMHMM | 318 | 340 | 23 | – | – | |
| Phobius | 319 | 337 | 19 | – | – | |
| Phobius | 338 | 356 | 19 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 357 | 377 | 21 | – | – | |
| Phobius | 378 | 403 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v3339020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3339020.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.