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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006706
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.645s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0247459.1
n.a. extensin [Brassica napus] gi|22001410|gb|AAM88422.1|AF527384_1 chr0 128254145 128256476 -
2 domain predictions
2 GO terms
Lj2g3v0264020.1
n.a. hydroxyproline-rich glycoprotein [Solanum tuberosum] gi|24745591|dbj|BAC23028.1| chr2 4517140 4518051 -
2 domain predictions
2 GO terms
Lj2g3v0264030.1
n.a. n.a. chr2 4517170 4517873 +
2 domain predictions
2 GO terms
Lj2g3v0264280.1
n.a. hydroxyproline-rich glycoprotein [Solanum tuberosum] gi|24745591|dbj|BAC23028.1| chr2 4530441 4533076 -
2 domain predictions
2 GO terms
LotjaGi2g1v0134100_LC.1
n.a. extensin 3; TAIR: AT1G21310.1 extensin 3; Swiss-Prot: sp|Q9FS16|EXTN3_ARATH Extensin-3; TrEMBL-Plants: tr|A0A176WBI8|A0A176WBI8_MARPO Uncharacterized protein; Found in the gene: LotjaGi2g1v0134100_LC LjG1.1_chr2 48642661 48646389 -
2 domain predictions
2 GO terms
LotjaGi2g1v0134100_LC.2
n.a. extensin 3; TAIR: AT1G21310.1 extensin 3; Swiss-Prot: sp|Q9FS16|EXTN3_ARATH Extensin-3; TrEMBL-Plants: tr|A0A176WBI8|A0A176WBI8_MARPO Uncharacterized protein; Found in the gene: LotjaGi2g1v0134100_LC LjG1.1_chr2 48644978 48646363 -
2 domain predictions
2 GO terms
LotjaGi2g1v0134300.1
n.a. Extensin; TAIR: AT1G21310.1 extensin 3; Swiss-Prot: sp|Q9FS16|EXTN3_ARATH Extensin-3; TrEMBL-Plants: tr|A0A176WBI8|A0A176WBI8_MARPO Uncharacterized protein; Found in the gene: LotjaGi2g1v0134300 LjG1.1_chr2 48680136 48683614 -
2 domain predictions
2 GO terms
LotjaGi2g1v0134300.2
n.a. extensin 3; TAIR: AT1G21310.1 extensin 3; Swiss-Prot: sp|Q9FS16|EXTN3_ARATH Extensin-3; TrEMBL-Plants: tr|A0A176WBI8|A0A176WBI8_MARPO Uncharacterized protein; Found in the gene: LotjaGi2g1v0134300 LjG1.1_chr2 48682089 48683426 -
2 domain predictions
2 GO terms