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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008217
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We have found 25 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.953s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0113989.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus] gi|449444935|ref|XP_004140229.1| chr0 49854536 49855126 -
2 domain predictions
2 GO terms
Lj0g3v0121959.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus] gi|449444935|ref|XP_004140229.1| chr0 54482473 54483103 +
2 domain predictions
2 GO terms
Lj0g3v0329079.1
n.a. Nodulin-like protein [Medicago truncatula] gi|357443695|ref|XP_003592125.1| chr0 172038992 172040456 -
2 domain predictions
2 GO terms
Lj1g3v2624860.1
n.a. PREDICTED: fe(2+)/Mn(2+) transporter pcl1-like [Cicer arietinum] gi|502106693|ref|XP_004493024.1| chr1 30427338 30427898 +
2 domain predictions
2 GO terms
Lj4g3v0336390.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max] gi|356528062|ref|XP_003532624.1| chr4 4063324 4064408 -
2 domain predictions
2 GO terms
Lj4g3v0336450.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus] gi|449444935|ref|XP_004140229.1| chr4 4077327 4077791 -
2 domain predictions
2 GO terms
Lj4g3v0336690.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max] gi|356510711|ref|XP_003524079.1| chr4 4116819 4118037 -
2 domain predictions
2 GO terms
Lj5g3v1954050.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max] gi|356576049|ref|XP_003556147.1| chr5 27602878 27604095 -
2 domain predictions
2 GO terms
Lj6g3v2222120.1
n.a. PREDICTED: vacuolar iron transporter homolog 4-like [Glycine max] gi|356528769|ref|XP_003532970.1| chr6 25988516 25990084 +
2 domain predictions
2 GO terms
LotjaGi1g1v0016300.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT2G01770.1 vacuolar iron transporter 1; Swiss-Prot: sp|Q9ZUA5|VIT1_ARATH Vacuolar iron transporter 1; TrEMBL-Plants: tr|V7CT43|V7CT43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0016300 LjG1.1_chr1 2088246 2090776 +
3 domain predictions
2 GO terms
LotjaGi1g1v0128600.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT4G27870.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q8LPT3|MEBL_ARATH Membrane protein of ER body-like protein; TrEMBL-Plants: tr|A0A0B2SHI6|A0A0B2SHI6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0128600 LjG1.1_chr1 20516038 20522984 +
2 domain predictions
2 GO terms
LotjaGi1g1v0469900.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT2G01770.1 vacuolar iron transporter 1; Swiss-Prot: sp|Q9ZUA5|VIT1_ARATH Vacuolar iron transporter 1; TrEMBL-Plants: tr|A0A151TBJ0|A0A151TBJ0_CAJCA Fe(2+)/Mn(2+) transporter pcl1; Found in the gene: LotjaGi1g1v0469900 LjG1.1_chr1 98041850 98044456 +
3 domain predictions
2 GO terms
LotjaGi2g1v0133500.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|V7C1H5|V7C1H5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0133500 LjG1.1_chr2 48349415 48351413 -
3 domain predictions
2 GO terms
LotjaGi2g1v0133500.2
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|V7C1H5|V7C1H5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0133500 LjG1.1_chr2 48349660 48350331 -
3 domain predictions
2 GO terms
LotjaGi3g1v0086100_LC.1
n.a. Membrane protein of er body-like protein; TAIR: AT5G24290.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|F4KFS7|MEB2_ARATH Membrane protein of ER body 2; TrEMBL-Plants: tr|I3T3H3|I3T3H3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0086100_LC LjG1.1_chr3 9665463 9673013 +
2 domain predictions
2 GO terms
LotjaGi4g1v0031000.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|P16313|NO21_SOYBN Nodulin-21; TrEMBL-Plants: tr|H3JSR8|H3JSR8_LOTJA Putative uncharacterized protein SEN1; Found in the gene: LotjaGi4g1v0031000 LjG1.1_chr4 3854764 3857717 +
3 domain predictions
2 GO terms
LotjaGi4g1v0031200.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|V7CLG5|V7CLG5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0031200 LjG1.1_chr4 3863886 3865036 -
3 domain predictions
2 GO terms
LotjaGi4g1v0031300_LC.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|A0A0L9TL65|A0A0L9TL65_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0031300_LC LjG1.1_chr4 3877897 3878629 -
3 domain predictions
2 GO terms
LotjaGi4g1v0031500_LC.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|V7CLG5|V7CLG5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0031500_LC LjG1.1_chr4 3903158 3904213 -
3 domain predictions
2 GO terms
LotjaGi4g1v0031500_LC.2
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|P16313|NO21_SOYBN Nodulin-21; TrEMBL-Plants: tr|I3T278|I3T278_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0031500_LC LjG1.1_chr4 3903158 3904213 -
3 domain predictions
2 GO terms
LotjaGi4g1v0031700_LC.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT1G21140.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|P16313|NO21_SOYBN Nodulin-21; TrEMBL-Plants: tr|I3SIX1|I3SIX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0031700_LC LjG1.1_chr4 3916966 3919867 -
3 domain predictions
2 GO terms
LotjaGi4g1v0458600.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT2G01770.1 vacuolar iron transporter 1; Swiss-Prot: sp|Q9ZUA5|VIT1_ARATH Vacuolar iron transporter 1; TrEMBL-Plants: tr|V7CT43|V7CT43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0458600 LjG1.1_chr4 82955533 82958034 -
3 domain predictions
2 GO terms
LotjaGi4g1v0458600.2
n.a. Vacuolar iron transporter-like protein; TAIR: AT2G01770.1 vacuolar iron transporter 1; Swiss-Prot: sp|Q9ZUA5|VIT1_ARATH Vacuolar iron transporter 1; TrEMBL-Plants: tr|V7CT43|V7CT43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0458600 LjG1.1_chr4 82955728 82958101 -
3 domain predictions
2 GO terms
LotjaGi5g1v0292000.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|I3T9H4|I3T9H4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0292000 LjG1.1_chr5 60913985 60915358 -
3 domain predictions
2 GO terms
LotjaGi6g1v0356300.1
n.a. Vacuolar iron transporter-like protein; TAIR: AT3G43660.1 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4; TrEMBL-Plants: tr|A0A0B2RMY6|A0A0B2RMY6_GLYSO Vacuolar iron transporter like 4; Found in the gene: LotjaGi6g1v0356300 LjG1.1_chr6 66781543 66782898 +
3 domain predictions
2 GO terms