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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011402
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 28 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.639s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0060819.1
n.a. PREDICTED: phospholipase D epsilon-like [Glycine max] gi|356556716|ref|XP_003546669.1| chr0 20297377 20301250 -
2 domain predictions
4 GO terms
Lj0g3v0101819.1
n.a. PREDICTED: phospholipase D delta-like [Glycine max] gi|356495342|ref|XP_003516537.1| chr0 43229390 43236771 -
2 domain predictions
4 GO terms
Lj1g3v1911660.1
n.a. Phospholipase D alpha [Medicago truncatula] gi|357466237|ref|XP_003603403.1| chr1 22659153 22663710 -
2 domain predictions
4 GO terms
Lj1g3v1911690.1
n.a. Phospholipase D alpha [Medicago truncatula] gi|357466245|ref|XP_003603407.1| chr1 22666315 22670919 -
2 domain predictions
4 GO terms
Lj2g3v1647880.1
n.a. PREDICTED: phospholipase D delta-like [Glycine max] gi|356495342|ref|XP_003516537.1| chr2 25730494 25737875 -
2 domain predictions
4 GO terms
Lj2g3v2003100.1
n.a. PREDICTED: phospholipase D gamma 1-like isoform 1 [Glycine max] gi|356497199|ref|XP_003517450.1| chr2 30626903 30636897 +
2 domain predictions
4 GO terms
Lj3g3v0305820.1
n.a. PREDICTED: phospholipase D epsilon-like [Glycine max] gi|356556716|ref|XP_003546669.1| chr3 2231066 2234696 +
2 domain predictions
4 GO terms
LotjaGi1g1v0384000.1
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JB26|G7JB26_MEDTR Phospholipase D; Found in the gene: LotjaGi1g1v0384000 LjG1.1_chr1 86737921 86742513 -
2 domain predictions
4 GO terms
LotjaGi1g1v0384000.2
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|P86387|PLDA1_CARPA Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JB30|G7JB30_MEDTR Phospholipase D; Found in the gene: LotjaGi1g1v0384000 LjG1.1_chr1 86737921 86752441 -
2 domain predictions
4 GO terms
LotjaGi1g1v0384000.3
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JB26|G7JB26_MEDTR Phospholipase D; Found in the gene: LotjaGi1g1v0384000 LjG1.1_chr1 86737988 86742479 -
2 domain predictions
4 GO terms
LotjaGi1g1v0384000.4
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|P86387|PLDA1_CARPA Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JB30|G7JB30_MEDTR Phospholipase D; Found in the gene: LotjaGi1g1v0384000 LjG1.1_chr1 86745163 86750122 -
2 domain predictions
4 GO terms
LotjaGi1g1v0384000.5
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|P86387|PLDA1_CARPA Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JB30|G7JB30_MEDTR Phospholipase D; Found in the gene: LotjaGi1g1v0384000 LjG1.1_chr1 86745229 86752441 -
2 domain predictions
4 GO terms
LotjaGi1g1v0432500.1
n.a. Phospholipase D; TAIR: AT4G35790.2 phospholipase D delta; Swiss-Prot: sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta; TrEMBL-Plants: tr|I1JSY8|I1JSY8_SOYBN Phospholipase D; Found in the gene: LotjaGi1g1v0432500 LjG1.1_chr1 92740621 92748506 +
2 domain predictions
4 GO terms
LotjaGi1g1v0432500.2
n.a. Phospholipase D; TAIR: AT4G35790.1 phospholipase D delta; Swiss-Prot: sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta; TrEMBL-Plants: tr|A0A151TCK8|A0A151TCK8_CAJCA Phospholipase D; Found in the gene: LotjaGi1g1v0432500 LjG1.1_chr1 92741080 92746735 +
2 domain predictions
4 GO terms
LotjaGi2g1v0377200.1
n.a. Phospholipase D; TAIR: AT4G35790.2 phospholipase D delta; Swiss-Prot: sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta; TrEMBL-Plants: tr|A0A1J7HDZ2|A0A1J7HDZ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0377200 LjG1.1_chr2 87452615 87461514 -
2 domain predictions
4 GO terms
LotjaGi2g1v0430200.1
n.a. Phospholipase D; TAIR: AT2G42010.1 phospholipase D beta 1; Swiss-Prot: sp|P93733|PLDB1_ARATH Phospholipase D beta 1; TrEMBL-Plants: tr|I1JA23|I1JA23_SOYBN Phospholipase D; Found in the gene: LotjaGi2g1v0430200 LjG1.1_chr2 92722110 92733554 +
2 domain predictions
4 GO terms
LotjaGi3g1v0009200.1
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|I1M5T2|I1M5T2_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0009200 LjG1.1_chr3 1047532 1054829 -
2 domain predictions
4 GO terms
LotjaGi3g1v0009200.2
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|I1M5T2|I1M5T2_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0009200 LjG1.1_chr3 1047532 1055202 -
2 domain predictions
4 GO terms
LotjaGi3g1v0024600.1
n.a. Phospholipase D; TAIR: AT1G55180.1 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|I1MCY6|I1MCY6_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0024600 LjG1.1_chr3 2712878 2724750 +
2 domain predictions
4 GO terms
LotjaGi3g1v0024600.2
n.a. Phospholipase D; TAIR: AT1G55180.1 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|I1MCY6|I1MCY6_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0024600 LjG1.1_chr3 2713131 2716768 +
2 domain predictions
4 GO terms
LotjaGi3g1v0024600.3
n.a. Phospholipase D; TAIR: AT1G55180.1 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|I1MCY6|I1MCY6_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0024600 LjG1.1_chr3 2713131 2716768 +
2 domain predictions
4 GO terms
LotjaGi3g1v0357200.1
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JI50|G7JI50_MEDTR Phospholipase D; Found in the gene: LotjaGi3g1v0357200 LjG1.1_chr3 73905607 73910869 -
2 domain predictions
4 GO terms
LotjaGi3g1v0357200.2
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|I1KVD8|I1KVD8_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0357200 LjG1.1_chr3 73906829 73909455 -
2 domain predictions
4 GO terms
LotjaGi3g1v0357200.3
n.a. Phospholipase D; TAIR: AT3G15730.1 phospholipase D alpha 1; Swiss-Prot: sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1; TrEMBL-Plants: tr|G7JI50|G7JI50_MEDTR Phospholipase D; Found in the gene: LotjaGi3g1v0357200 LjG1.1_chr3 73906829 73910303 -
2 domain predictions
4 GO terms
LotjaGi3g1v0426100.1
n.a. Phospholipase D; TAIR: AT1G55180.1 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|K7L7M9|K7L7M9_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0426100 LjG1.1_chr3 83569156 83573003 -
2 domain predictions
4 GO terms
LotjaGi3g1v0426100.2
n.a. Phospholipase D; TAIR: AT1G55180.2 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|K7L7N0|K7L7N0_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0426100 LjG1.1_chr3 83569541 83572678 -
2 domain predictions
4 GO terms
LotjaGi3g1v0426100.3
n.a. Phospholipase D; TAIR: AT1G55180.2 phospholipase D alpha 4; Swiss-Prot: sp|Q9C888|PLDA4_ARATH Phospholipase D alpha 4; TrEMBL-Plants: tr|K7L7N0|K7L7N0_SOYBN Phospholipase D; Found in the gene: LotjaGi3g1v0426100 LjG1.1_chr3 83569541 83572850 -
2 domain predictions
4 GO terms
LotjaGi4g1v0387800.1
n.a. Phospholipase D; TAIR: AT4G35790.2 phospholipase D delta; Swiss-Prot: sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta; TrEMBL-Plants: tr|I1K497|I1K497_SOYBN Phospholipase D; Found in the gene: LotjaGi4g1v0387800 LjG1.1_chr4 76625942 76631929 -
2 domain predictions
4 GO terms