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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012391
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.390s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2928410.1
n.a. BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| chr3 36606657 36618050 +
2 domain predictions
2 GO terms
Lj3g3v2928410.2
n.a. BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| chr3 36607398 36618050 +
2 domain predictions
2 GO terms
Lj5g3v1681440.1
n.a. Serine/threonine protein phosphatase [Medicago truncatula] gi|357442633|ref|XP_003591594.1| chr5 23874799 23889323 -
2 domain predictions
2 GO terms
Lj5g3v1681440.2
n.a. PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] gi|356500242|ref|XP_003518942.1| chr5 23874799 23900121 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705011 25721213 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A061GVT6|A0A061GVT6_THECC Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705832 25716336 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705832 25720536 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705832 25720599 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.5
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0HHJ5|A0A0R0HHJ5_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705832 25720605 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.6
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.2 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25705832 25720633 -
2 domain predictions
2 GO terms
LotjaGi3g1v0183500.7
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0R0H3J2|A0A0R0H3J2_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0183500 LjG1.1_chr3 25708371 25720536 -
2 domain predictions
2 GO terms
LotjaGi3g1v0471100.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 LjG1.1_chr3 88687066 88700040 +
2 domain predictions
2 GO terms
LotjaGi3g1v0471100.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 LjG1.1_chr3 88687615 88697744 +
2 domain predictions
2 GO terms
LotjaGi3g1v0471100.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2; Swiss-Prot: sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2; TrEMBL-Plants: tr|A0A0D2Q811|A0A0D2Q811_GOSRA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 LjG1.1_chr3 88687662 88697744 +
2 domain predictions
2 GO terms
LotjaGi3g1v0471100.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 LjG1.1_chr3 88687662 88697744 +
2 domain predictions
2 GO terms
LotjaGi3g1v0471100.5
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G27210.1 BRI1 suppressor 1 (BSU1)-like 3; Swiss-Prot: sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3; TrEMBL-Plants: tr|A0A0B0P825|A0A0B0P825_GOSAR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0471100 LjG1.1_chr3 88687662 88697825 +
2 domain predictions
2 GO terms
LotjaGi5g1v0261000.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1; TrEMBL-Plants: tr|I1JFE9|I1JFE9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 LjG1.1_chr5 56963942 56980667 +
2 domain predictions
2 GO terms
LotjaGi5g1v0261000.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1; TrEMBL-Plants: tr|I1JFE9|I1JFE9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 LjG1.1_chr5 56964341 56980263 +
2 domain predictions
2 GO terms
LotjaGi5g1v0261000.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1; TrEMBL-Plants: tr|I1JFE9|I1JFE9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 LjG1.1_chr5 56964341 56980263 +
2 domain predictions
2 GO terms
LotjaGi5g1v0261000.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1; TrEMBL-Plants: tr|I1JFE9|I1JFE9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 LjG1.1_chr5 56964341 56980263 +
2 domain predictions
2 GO terms
LotjaGi5g1v0261000.5
n.a. Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1; TrEMBL-Plants: tr|I1JFE9|I1JFE9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 LjG1.1_chr5 56964341 56980263 +
2 domain predictions
2 GO terms