Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013899
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.139s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] gi|15237740|ref|NP_200680.1| chr0 7204272 7206975 +
n.a. PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi|356518183|ref|XP_003527761.1| chr1 21478965 21482527 +
n.a. Smr protein/MutS2 C-terminal [Medicago truncatula] gi|124359484|gb|ABN05922.1| chr1 32753286 32757217 +
n.a. PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi|356518183|ref|XP_003527761.1| chr5 4587337 4593140 +
n.a. protein silencing defective 5 [Arabidopsis thaliana] gi|334185369|ref|NP_001189900.1| chr6 24086562 24090332 -
n.a. protein silencing defective 5 [Arabidopsis thaliana] gi|240255350|ref|NP_188158.4| chr6 24086562 24092695 -
n.a. Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A0L9UH72|A0A0L9UH72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0372100 LjG1.1_chr1 85019498 85024066 +
n.a. Smr (Small MutS-related) domain protein; TAIR: AT5G23520.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|Q86UW6|N4BP2_HUMAN NEDD4-binding protein 2; TrEMBL-Plants: tr|K7LFV6|K7LFV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492900 LjG1.1_chr1 100641347 100645609 +
n.a. Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800 LjG1.1_chr5 8148384 8152956 +
n.a. CTC-interacting domain 7; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800 LjG1.1_chr5 8148384 8152956 +
n.a. Smr domain-containing protein, putative; TAIR: AT5G58720.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|O65573|Y5872_ARATH SMR domain-containing protein At5g58720; TrEMBL-Plants: tr|A0A1J7H576|A0A1J7H576_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113600 LjG1.1_chr6 27208552 27215554 -
n.a. Smr domain-containing protein, putative; TAIR: AT3G15390.1 silencing defective 5; Swiss-Prot: sp|Q9LUQ3|SDE5_ARATH Putative nuclear RNA export factor SDE5; TrEMBL-Plants: tr|I1M254|I1M254_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333100 LjG1.1_chr6 64787780 64795487 -