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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0018339 |
| Transcript ID | Lj0g3v0018339.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] gi|15237740|ref|NP_200680.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 164 | 164 | 3.40E-91 | – | |
| PANTHER | 1 | 164 | 164 | 3.40E-91 | – | |
| SMART | 36 | 101 | 66 | 8.20E-23 | ||
| Pfam | 37 | 100 | 64 | 8.40E-19 | ||
| SMART | 106 | 164 | 59 | 0.0035 | ||
| SUPERFAMILY | 108 | 163 | 56 | 1.83E-09 | ||
| ProSiteProfiles | 109 | 164 | 56 | 13.609 | ||
| Pfam | 109 | 163 | 55 | 4.00E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0018339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0018339.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.