Domain Predictions — View

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PF08590

Source: Pfam

Description

Domain of unknown function (DUF1771)

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0018339.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] gi\|15237740\|ref\|NP_200680.1\|	Domains IPR002625 IPR013899 PF01713 PF08590 PS50828 PTHR13308 PTHR13308:SF22 SM00463 SM01162 SSF160443	10
Lj1g3v1788400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi\|356518183\|ref\|XP_003527761.1\|	Domains IPR013899 PF08590 PTHR13308 SM01162 cd14371	5
Lj1g3v2908510.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr protein/MutS2 C-terminal [Medicago truncatula] gi\|124359484\|gb\|ABN05922.1\|	Domains IPR002625 IPR013899 PF01713 PF08590 PS50828 PTHR13308 SM00463 SM01162 SSF160443 mobidb-lite	10
Lj5g3v0470290.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi\|356518183\|ref\|XP_003527761.1\|	Domains Coil IPR002625 IPR013899 PF08590 PS50828 PTHR13308 SM01162 SSF160443 cd14371 mobidb-lite	10
Lj6g3v2043120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein silencing defective 5 [Arabidopsis thaliana] gi\|334185369\|ref\|NP_001189900.1\|	Domains Coil IPR013899 PF08590 PTHR13308 PTHR13308:SF17 SM01162 mobidb-lite	7
Lj6g3v2043120.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein silencing defective 5 [Arabidopsis thaliana] gi\|240255350\|ref\|NP_188158.4\|	Domains Coil IPR013899 PF08590 PTHR13308 PTHR13308:SF17 SM01162 mobidb-lite	7
LotjaGi1g1v0372100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp\|O64843\|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr\|A0A0L9UH72\|A0A0L9UH72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0372100	Domains G3DSA:3.30.1370.110 IPR002625 IPR013899 IPR036063 IPR041806 PF08590 PTHR46651 PTHR46651:SF1 SM00463 SM01162 SSF160443 cd14371	12
LotjaGi1g1v0492900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr (Small MutS-related) domain protein; TAIR: AT5G23520.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp\|Q86UW6\|N4BP2_HUMAN NEDD4-binding protein 2; TrEMBL-Plants: tr\|K7LFV6\|K7LFV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492900	Domains G3DSA:3.30.1370.110 IPR002625 IPR013899 IPR036063 PF01713 PF08590 PS50828 PTHR47812 SM00463 SM01162 SSF160443 mobidb-lite	12
LotjaGi5g1v0048800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp\|O64843\|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr\|A0A072VDP3\|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800	Domains Coil G3DSA:3.30.1370.110 IPR002625 IPR013899 IPR036063 IPR041806 PF01713 PF08590 PS50828 PTHR46651 PTHR46651:SF1 SM00463 SM01162 SSF160443 cd14371 mobidb-lite	16
LotjaGi5g1v0048800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CTC-interacting domain 7; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp\|O64843\|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr\|A0A072VDP3\|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800	Domains IPR013899 IPR041806 PF08590 PTHR46651 PTHR46651:SF1 SM01162 cd14371 mobidb-lite	8
LotjaGi6g1v0113600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr domain-containing protein, putative; TAIR: AT5G58720.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp\|O65573\|Y5872_ARATH SMR domain-containing protein At5g58720; TrEMBL-Plants: tr\|A0A1J7H576\|A0A1J7H576_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113600	Domains G3DSA:3.30.1370.110 IPR002625 IPR013899 IPR036063 PF01713 PF08590 PS50828 PTHR47676 SM00463 SM01162 SSF160443 mobidb-lite	12
LotjaGi6g1v0333100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Smr domain-containing protein, putative; TAIR: AT3G15390.1 silencing defective 5; Swiss-Prot: sp\|Q9LUQ3\|SDE5_ARATH Putative nuclear RNA export factor SDE5; TrEMBL-Plants: tr\|I1M254\|I1M254_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333100	Domains Coil IPR013899 IPR015940 PF08590 PS50030 PTHR47872 PTHR47872:SF1 SM01162 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33