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IPR013899

Source: InterPro

Description

IPR013899 is a Domain of unknown function DUF1771.

<p>This domain is highly charged and may represent a small helical extension of the Smr domain [interpro:IPR002625], known as N-ext, whose function is not yet clear [[cite:PUB00098095]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript Name Description Predicted domains Domain count
Lj0g3v0018339.1
– Smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] gi|15237740|ref|NP_200680.1|
Domains
10
Lj1g3v1788400.1
– PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi|356518183|ref|XP_003527761.1|
Domains
5
Lj1g3v2908510.1
– Smr protein/MutS2 C-terminal [Medicago truncatula] gi|124359484|gb|ABN05922.1|
Domains
10
Lj5g3v0470290.1
– PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] gi|356518183|ref|XP_003527761.1|
Domains
10
Lj6g3v2043120.1
– Protein silencing defective 5 [Arabidopsis thaliana] gi|334185369|ref|NP_001189900.1|
Domains
7
Lj6g3v2043120.2
– Protein silencing defective 5 [Arabidopsis thaliana] gi|240255350|ref|NP_188158.4|
Domains
7
LotjaGi1g1v0372100.1
– Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A0L9UH72|A0A0L9UH72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0372100
Domains
12
LotjaGi1g1v0492900.1
– Smr (Small MutS-related) domain protein; TAIR: AT5G23520.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|Q86UW6|N4BP2_HUMAN NEDD4-binding protein 2; TrEMBL-Plants: tr|K7LFV6|K7LFV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492900
Domains
12
LotjaGi5g1v0048800.1
– Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800
Domains
16
LotjaGi5g1v0048800.2
– CTC-interacting domain 7; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800
Domains
8
LotjaGi6g1v0113600.1
– Smr domain-containing protein, putative; TAIR: AT5G58720.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|O65573|Y5872_ARATH SMR domain-containing protein At5g58720; TrEMBL-Plants: tr|A0A1J7H576|A0A1J7H576_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113600
Domains
12
LotjaGi6g1v0333100.1
– Smr domain-containing protein, putative; TAIR: AT3G15390.1 silencing defective 5; Swiss-Prot: sp|Q9LUQ3|SDE5_ARATH Putative nuclear RNA export factor SDE5; TrEMBL-Plants: tr|I1M254|I1M254_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333100
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 8.33