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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015256
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.788s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0248479.1
n.a. PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X1 [Cicer arietinum] gi|502089135|ref|XP_004488827.1| chr0 128801369 128805462 -
3 domain predictions
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Lj0g3v0344769.1
n.a. PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Glycine max] gi|356525780|ref|XP_003531501.1| chr0 180905578 180906345 +
3 domain predictions
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Lj3g3v0965840.1
n.a. PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X2 [Cicer arietinum] gi|502089140|ref|XP_004488828.1| chr3 12847330 12851309 -
3 domain predictions
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Lj3g3v0965840.2
n.a. PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X1 [Cicer arietinum] gi|502089135|ref|XP_004488827.1| chr3 12847330 12852288 -
3 domain predictions
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Lj6g3v1887830.1
n.a. PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Glycine max] gi|356525780|ref|XP_003531501.1| chr6 20984753 20987415 -
3 domain predictions
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LotjaGi1g1v0535000.1
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 LjG1.1_chr1 106332510 106337194 +
3 domain predictions
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LotjaGi1g1v0535000.2
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 LjG1.1_chr1 106333126 106336510 +
3 domain predictions
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LotjaGi1g1v0535000.3
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 LjG1.1_chr1 106333126 106336510 +
3 domain predictions
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LotjaGi3g1v0139600.1
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 LjG1.1_chr3 18479444 18484625 -
3 domain predictions
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LotjaGi3g1v0139600.2
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 LjG1.1_chr3 18479651 18484544 -
3 domain predictions
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LotjaGi3g1v0139600.3
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 LjG1.1_chr3 18479872 18483538 -
3 domain predictions
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LotjaGi5g1v0145300.1
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0145300 LjG1.1_chr5 36853952 36858520 +
3 domain predictions
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LotjaGi5g1v0145300.2
n.a. Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q54XD8|IF2G_DICDI Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi5g1v0145300 LjG1.1_chr5 36854707 36858102 +
3 domain predictions
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