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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0139600 |
| Transcript ID | LotjaGi3g1v0139600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18479444..18484625) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAGGAAACATTATTCAAATTCCAATTTAATTTCTTTAAAAATCAAGAGATTTTTAAAAAAATAGAGCAAAGCATCTT CTTTTTGGTTAAAAAAGTTGCCTTTTAATCCAAATTCTTGGCGAACCCTAATCAAAATCCTATCACAACGCATTCAGACT CTAATCTGAAATCTTCTTCTTCCTCCTCTGACATTGTTTCTGCAATTCACCGTTCATCTGCGCCCAAACCCTAACTCGAG GTACCCCTTCTCGTTCTTCTTATCATCCTCACGTTTTTCGCTTTTTCTGCTTCCACTGTTAGTCTGAAACTCATTCACTT ACTCTGATTTTTATGCATGTGAGGTGTTTTTTTGAATTTGGGATGAAGGGTTACTGATAATTATGTAGTTTTGATTTTAC TAGTAATACACTGTCTTGGTCTATAGTAAATTTATGGGAAATTAATATGATCTTAGCATATGGGAAGCAATTACACCCAC TTGTGCTACCATTTTAAATAAAAATGGCTAGCAATAGCAATAGCTGCCCATTTAATCAGGTGAGATTGAATCAAGCCAAC ACTAGTGTTATCAAATATCCGCCATGGCAGTTTCTCATGGCGGTTTTTTGGCCGATATCCTGCCATATGGCCGCAATATT CCGCCATTATTTGTCATGTATGGCGGGATTTAGGCTCTGCGCCACGACCCCGCCATCCACAATTAACAACACTTCCCAAC ACCCCCAAAATCCAACCAAAAACCAAACAATAGAACACCGAAACCTCTAAACATCAGTACATCACACCACATGGAAAAAT AATCCACAACAAATGTATAGAGAATTATAAAAATCCAAGTACCTATACATGGTCTATCCATTACACAGACTTACTAAAGT TGTAGGGATTAACTGCCAAAAAGTGAAGTTGAGGAATCTGTTTATATATGTCTGATATATGAAGGGTTTTCTATGGACCT TTTCCTTTTATTGGAAAAGTATAAAAAAAAAAGGATGCTGAACAATTATCAATATCTATATAAATGCAGATCAGATACTT TAGCTTCAAAAATCACTTGATTAGAGTTTTCATTGGAAGCAGTCACCATGTCACGGAAGGGTTTGATGGAACAAGACCTG AGTAAGTTGGATGTGACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAAGCTACTATTAATATTGGTAATAC GTTCTCTCATGTTTGTGAATGTAATTATTTCCAATTTGTTACAGCAGCAGTATTTGAACTTGAACAATTTTGTCATTAAA AAAATTATGTTAGCTTCTTTTTACATTGATGGGTATTAATCCTGATGAGTAATATTGTAACCTGGCAGGCACCATAGGCC ATGTGGCCCATGGAAAGTCAACAGTTGTGAAAGCAATATCAGGTGTTCAGGTATTCTTTTGTTTTAAATTTTTCACTACT TTTGTTGGAGGTCTAGCGGTGAGGATAATGGTGTTTAACACTTAAACTTTGTACATATATGTAATTCCCGTCACATAGTC TTTGGATAGATTCTTTGTTGTGTCATGTGTGATATGTTTCAAATGGAAATAAAGTATCTACTCAATTGTCATAAGTCATA ACTCATAAGGGTTATTGCTAACAGCTTATATTTGCTCAGTATAAGTAGCTGGTACTTGGTACCTACATGAAGTTTGTCAA AATGAGTTGCCATAGAATATGAAGTGGGTTTGGGGAAGCCCTCCCCAAGGAAGTGGCTATCATCTCCTGGTGGTTACATA GATATTTGACAATATTTTGATCAATTGAATATGCTACCCTCTTTATTTTGCATCTTCAATCTTTAAGAAGGATTATGCAA AACCATGTGAGATTGTATTATTAATATATTTTTCCCTAAATCCTTGGATATTAAAACTGTCCACCTCTGGTTTCTGGTGA TTGTCGTGCAGACCGTGCGTTTTAAAAATGAGTTGGAACGTAACATTACAATCAAGCTTGGCTATGCAAATGCAAAAATA TATAAATGTGAAGATGAACGGTGTTCGAGGCCTATGAGCTACAGGTGCGTTTTTTTATTTTGCACCCTCTATCTCTATTA TATTATCAGGTTATTTCAACTTTTGTGATGTGATCTAACATTTTCCACAGGGCTTATGGAAGTGGGAAGGAAGATGCTCC TATGTGTGAAGTACCAGGGTTTGAAAACTGCAAGATGAAATTGTTGAGACATGTTTCTTTTGTGGATTGCCCCGTAAATT CCAGTAGTCATTTGCTAACTAGGCTGTTTTATTCATGCTTTCATTAGATTTTAGATATAATGTAGGAGTATCTACGTTTA TATAACTGCACATTTGGTTTTACATTTCTTCCCCTCAGGGTAGTCTCTCACCCAATTCTTTTAATCCTAGGAAGATACTG TTATTGTTATGCGTGTGCATGTATGTCTATATGAATGTACTTATATACCTATATGTCCATTCACAAATTCTTAAGTGCTC TAGAGCAAGAGATAACACTTGTTCTTTACCATTAAATGTGTATCCCCTCAACCATGTAATCCATCACGATCTCTCTGTAG TTTCATTTTTAATGCATTTGACGTGATTCAGATCCAATGGTTTAGAATAAGAAACCTAAAATTTGCTTGTATATTTTAGC TTTGACTGTTTTCCATATAGTAAGATTTTTATATTTCTATGGGTATGTATTCTTTTTAATAGTGTCAGGAGGCTACAGGT TTCCACTCTGCTAAATCATTGAATATATGTTTAGGTTGGTTGCTTTTACTTATGATTTCTGTTTTTACTTGGCCGATTTC TGTAGGGACATGATATTCTCATGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATTGCTGCTA ATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCATTTAGCTGCTGTTGAAATTATGCGTCTGCAGCACATTATTATCCTT CAGAACAAGGTAGACCTGATCCAAGAAAATGTGGCAATCAATCAGCATGAAGTTATTCAGAAGTTTATTGAAGTAAGTGT TCTTTGAAGTGGTCTCTGCTATACATGTGAATCCCTCTTTCACAAGCTTACGCTATACTGAGTATACTCCTCTTTTTTGG TGGCTTACCAGGGAACTGTTGCTGATAAGGCACCTGTGGTACCCATTTCAGCACAATTGAAGTATAATATTGATGTTGTG TGTGAATATATTGTGAAAAAGATCCCAATCCCTGAAAGGAACTTCATTTCTCCACCAAATATGATAGTAATTCGGTCATT TGATGTCAATAAACCTGGTTATGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGTAATTCTTT TTCTGGTCCATCTCCCAAATATAATTCTTTATTTGTATGATGTGACTTGCATATGTTAATATTTTTAATGGTTGGAATGA TTTCTTCCCTAACATTTTATACTGCATAGTTTTAAAAATGTTTAGTCTACTGTAGAATTTGAAGTGTTTAGCGAATAATG CCAATTGCCAAGGGTGTGCCCTATTATACGTGGATGCTTCATGCTTAATCAATGAGTAATAAGTGGCCTTCAATTTGTTG AATATTTTTCTATTTTTGAAAACTTGTTTACACATGTAATATTCCAAAATACCTGGAACACAGTATGCCATTCTATTTAA TGTCAGTATTTTGATGTTTGGAATGATATCTGCCTTTACATTTATATGCATAATTTTAAAAATGTTAAGTCTGCTGTAGA TTGTTTACGTTTAAGTTGTGTGCCTTATAATACATGGATGCTTAATGAATGAGATGCAAGTGGCCTTCTAATTTGTTGAT TTTTGTTTTGGAAACTTTTTATGCATGTTATTTTCTTTACCTTGGAACACTGAATGCCATTTTATTTCCAAACCAGATTA AAAGAATTAACTGTGTCTGTAGATGAAATGACATGTTCTTTTGAAGCAAAGCTGACAATTTGTATTTTACAGGGTGTTTT AAAGGTCAACCAATTCATTGAAGTTCGACCTGGGATGATTGATAAAGATGAAAGTGGAAACATTCGATGCACACCCATAT ACTCCAGAATAGTATCATTATGCGCTGAACAAAATGAGCTTCAATTTGCTGTGCCTGGAGGCCTTATTGGTGTTGGGACC ACGATGGATCCCACTTTGACGCGTGCTGACAGGTTGGTAGGGCAAGTTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTT TGTTGAACTTGAGGTAGGTGACCATCAGTTATTTAGTTCATAATGACAAGTGGGGATAAATAGCTTGCCTTTCAAAATAT CTTCACTATTCACTTTTACTTGTGTGTTAAGCTTTCTTGTCATGATCCGCGAAAGAGATGACACTCAGTTCTCCTGTTGT TGGAAAAACTTGATTTATAGATGAATTGGTGACTTGGTATTGCAGGTAAACTTTTTCTTGCTTCGGCGGCTTCTCGGTGT CCGAACAAAAGGCACAGAGAGACAGGGAAAGGTAGCTAAGCTGACCAAAGGAGAGACGCTAATGTTGAACATTGGATCAA TGTCAACAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGCTAAATTGCAACTCACTGGCCCTGTGTGCACTAGCCAG GGTGAGAAGATCGCACTCAGTCGACGTGTCGAGAAGCATTGGCGTCTTATCGGGTGGGGTCAAATCCAAGCCGGAATCAC TCTTGCTGTCCCTCCTGCACCTGTACTGAAGTGAAAGACAAACATTGAATTGAAAGACAAACACCAGTTATAGAAAAGTG AGATGAATTTAGGTATATGGGAAGGGAGACAATTGTTGGGAACCATTTTTTTGAGATGGAGAAGAAAACATTTGGATTGT CAAATTTTGTTTTTACATCTTTGTTGTACCTACTTATCACTTATTGAGTATGTACTTGAAGCTAGCATTTATCTTACACT TGTTTCATTTCATTCCATGATCACCTTACCAATCAGCATCGTGTATCCAGCAGCCAGCAGGGAAGCATTTCACGTTGTCA GCAACGATTTATCCCAATAATATATCACCATCCCCCACTCGCGTGAGTTCTGAAAATAGCCTCAAGTTTTTTAAGCTTCC CCCAATTCAAAATATGGAACGTAAATTTGTTTTTTTAGCTAATGCAATTTATTTACGGAAGC
CDS sequence (LotjaGi3g1v0139600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATTGCTGCTAATGAAAGCTGCCCTCAACCTCAAACTTC TGAGCATTTAGCTGCTGTTGAAATTATGCGTCTGCAGCACATTATTATCCTTCAGAACAAGGTAGACCTGATCCAAGAAA ATGTGGCAATCAATCAGCATGAAGTTATTCAGAAGTTTATTGAAGGAACTGTTGCTGATAAGGCACCTGTGGTACCCATT TCAGCACAATTGAAGTATAATATTGATGTTGTGTGTGAATATATTGTGAAAAAGATCCCAATCCCTGAAAGGAACTTCAT TTCTCCACCAAATATGATAGTAATTCGGTCATTTGATGTCAATAAACCTGGTTATGAGGTTGATGAAATAAAAGGAGGTG TAGCTGGTGGAAGCATTCTGAGGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGGATGATTGATAAAGAT GAAAGTGGAAACATTCGATGCACACCCATATACTCCAGAATAGTATCATTATGCGCTGAACAAAATGAGCTTCAATTTGC TGTGCCTGGAGGCCTTATTGGTGTTGGGACCACGATGGATCCCACTTTGACGCGTGCTGACAGGTTGGTAGGGCAAGTTC TTGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTAAACTTTTTCTTGCTTCGGCGGCTTCTCGGTGTC CGAACAAAAGGCACAGAGAGACAGGGAAAGGTAGCTAAGCTGACCAAAGGAGAGACGCTAATGTTGAACATTGGATCAAT GTCAACAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGCTAAATTGCAACTCACTGGCCCTGTGTGCACTAGCCAGG GTGAGAAGATCGCACTCAGTCGACGTGTCGAGAAGCATTGGCGTCTTATCGGGTGGGGTCAAATCCAAGCCGGAATCACT CTTGCTGTCCCTCCTGCACCTGTACTGAAGTGA
Protein sequence (LotjaGi3g1v0139600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPI SAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKD ESGNIRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGV RTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQLTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGIT LAVPPAPVLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 102 | 102 | 3.44E-20 | ||
| Pfam | 1 | 100 | 100 | 3.2E-13 | ||
| ProSiteProfiles | 1 | 103 | 103 | 22.854 | ||
| PANTHER | 1 | 328 | 328 | 5.5E-208 | – | |
| Gene3D | 1 | 104 | 104 | 3.0E-29 | – | |
| PANTHER | 1 | 328 | 328 | 5.5E-208 | – | |
| SUPERFAMILY | 104 | 218 | 115 | 4.78E-36 | ||
| CDD | 105 | 218 | 114 | 1.24284E-62 | – | |
| Gene3D | 105 | 220 | 116 | 2.4E-50 | – | |
| Pfam | 132 | 214 | 83 | 6.3E-10 | ||
| SUPERFAMILY | 219 | 316 | 98 | 1.73E-31 | ||
| Gene3D | 221 | 320 | 100 | 3.7E-39 | – | |
| CDD | 221 | 315 | 95 | 1.98021E-47 | ||
| Pfam | 226 | 315 | 90 | 2.6E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0139600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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