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IPR015256

Description

IPR015256 is a Initiation factor eIF2 gamma, C-terminal.

<p>In eukaryotes and archaea, the e/aIF2 factor is involved in the initiation of protein biosynthesis. In its GTP bound form, e/aIF2 delivers methionylated initiator tRNA to the small subunit of the ribosome. After the pairing between the AUG initiation codon on mRNA and the CAU anticodon of the initiator tRNA, GTP is hydrolysed and e/aIF2:GDP is released from the ribosome. In eukaryotes, eIF2B acts as the guanine nucleotide exchange factor for eIF2. Archaea have no equivalent of eIF2B, and the exchange between GDP and GTP is thought to be spontaneous [[cite:PUB00039286]]. eIF2 is composed of three subunits, alpha, beta and gamma. The gamma subunit forms the core of the heterotrimer and confers both tRNA binding and GTP/GDP binding [[cite:PUB00039286]].</p> <p>This entry represents the C-terminal domain of the gamma subunit of eukaryotic translation initiation factor 2 (eIF2-gamma) found in Eukaryota and Archaea. This domain has a β barrel structure with Greek key topology. It is required for formation of the ternary complex with GTP and initiator tRNA [[cite:PUB00011835]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X1 [Cicer arietinum] gi|502089135|ref|XP_004488827.1| 21
PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Glycine max] gi|356525780|ref|XP_003531501.1| 8
PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X2 [Cicer arietinum] gi|502089140|ref|XP_004488828.1| 20
PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X1 [Cicer arietinum] gi|502089135|ref|XP_004488827.1| 21
PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Glycine max] gi|356525780|ref|XP_003531501.1| 8
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 21
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 21
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0535000 21
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 19
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 19
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q2KHU8|IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi3g1v0139600 19
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0145300 21
Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q54XD8|IF2G_DICDI Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|G7IJ99|G7IJ99_MEDTR Eukaryotic translation initiation factor 2 EIF2-gamma-II; Found in the gene: LotjaGi5g1v0145300 19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd15490 CDD 1 7.69