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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0145300 |
| Transcript ID | LotjaGi5g1v0145300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0145300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:36853952..36858520) extracted from Lotus japonicus Gifu genome v1.2.
AGCTCCGGCGAGGACTTGCTCCATACGTTTTTAAAAGAGAGGGATTTAAACCACAATTTTTTCCGGTCAGGGACCTGTTT CAGACGGCGACACAAAGACAGGGACTAATATGAGGATTAAGCCAAAAAAAAAAAAGTTGCCATTTTATATAAAAATTCTT GGCGAACCCTAATCAGTATCCTATCAACAACGCACTCACACTCTATTCTGAAATCTTCTTCTTCCTCATCTGCGCCGAAA CCCTAACTCGAGGTACCCTTCTCGTTTTTCAACAACGCACTCACTCTATTCTGAAATCTTCTTCTTCCTCATCTGCGCCG AAACCCTAACTCGAGGTACCCCTTCTCGTTTTTCACTCTTTTTCTTTTCATGTTCTTGCTTTTTCTGCTTATGGGAACAC TGCCGTCTAGTATTGAGAATTTTGGATTGTGATATGCCAATAAAATTACAAATACAAATACAACTTCTCGTTTTTCACTC TTTTTCTTTTCATGTTCTTGCTTTTTCTGCTTATGGGAACTAGTATTGAGAATTTTGGATTGTGATATGCCAATAAAAAT ACAAATACAAATACAAATCGAATCGAATCTTTGTTTTTTTTGGTTACAATCGAATCGAATCTATTTATATAGGTCTGATA TATGAAGGCTGATATTGGAAAAGTTAAAAAAAAGATGCTGAACAATAATCAATATCTATATAAATGCAGATCAGATACTT TAGCTTCAAAAATCACTTCATTGGAAGCAGCCACCATGTCACGGAAGGGTTTGATGGAACAAGACCTGAGTAAGTTGGAT GTGTCAAAATTGCATCCACTTTCGCCTGAAGTCATATCTCGGCAAGCTACTATTAATATTGGTAATACGTTCTGTATTTA TTTCCGATTTGTTACAGCATTAGTATTTGAACTTGAACAATTTTGTGATTTAAAAAATCATGTTAGCTTCTTTCCATATT GATGGGCATTAATCCTGATGAGTAATATTGTAACCTGGCAGGCACCATAGGCCATGTGGCCCATGGAAAGTCAACCGTTG TGAAAGCAATATCAGGTGTTCAGGTATTCTTTTGTTTTAAATTTTTCATTTTTCACTAGGATAATGCTGTTTAACACTTT AACTTTGAACATATATGTAATTCCCGTTATATAGACTCTTTGTTGTCTCATGTGTGATCTGTTTCAAATGGAAATAAAGT ATCTACTCAATTGACATAAGTCATAACTCATAAGGGTTATTGCTAACCGCTTATATTTGCTCAGTATAAGTAGCTGTTAC TTGGTACCTACATCAAGTTTGTCAAAATGAGTTGCCATAGAATATGAAGTGGCAATCATCTCCTGGTGGTTACATAGATA TTTGACAATATTTTGATCAATTGAATATGCTACCCTCTTTATTTTCCATCTTCAATCTTTAAGAAGGATTATGCAAAACC TTGCAAGATTGTATTCTTGATATATTTCCCCTCAATGGTTTCCTGTGATTGTTGTGCAGACCGTGCGTTTTAAAAGTGAG TTGGAACGCAACATTACAATAAAGCTTGGCTATGCAAATGCAAAAATATATAAATGTGAAGATGCACGGTGTCCGAGGCC TATGAGCTACAAGTGGGGTTATTGTTTTGCACCCTCTTTCTCTATTATATTATCAGTTTATTTCAACTCTTGTGATGTGA TCTAACATTTTGCACAGGGCTTATGGAAGTGGGAAGGAAGATGCTCCTATGTGTGAAGTACCAGGGTTTGAAAACTGCAG GATGAAATTGTTGAGACATGTTTCTTTTGTCGATTGCCCGGTAAATTCCAGTAGTCATTTGCTAGCTAGGCTGTTTTATT CATGCTTTCATTAGATTTTAGATATAATGTAGGAGTATTTACGTTTTGGTTTTACGTTTCTTCCCCTCAACCCAATTCTT TTAATCCTAGGAAGATACTGTTATTGTTATGCGTGTGTATATGAATGTACTTATATACCTATATGTCTATTGACAAATTC TCAAGTGCTCTAGAGCAAGAGATAACACTTGTTCTTTACCATTAAATGTGTCCACCCTCAACCATGTAATCCATCATGAT GTCTCTGTAGTTTCATTTTTAATATATTTGATGTGATTCAGATCCAATGGCTTAGAATAAGAAACCTAAAATTTGCTTGT ATATTTTAGCTTTGACTGTTTCCCATATGGTGAGATTTTTATATTCCTATGGGAATTCTTTTTAGTAGAGTGTCAGGTGG CTACAGGTTTCCACTCTGCTAAATCATTGAATATATGTTTAGGTTGGTTGCTTTTACTTATGATTTCTGTTTTTACTTGG CCGATCTGTAGGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATT GCTGCTAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCATTTAGCTGCGGTTGAAATTATGCGTCTGCAGCACATTAT AATCCTTCAGAACAAGGTAGACCTAATCCCAGAAAACGTGGCAATCAATCAGCATGAAGATATTCAGAAGTTCATTGCAG TAAGTGTTCTTTGAAGTGGTCTATGCTATACATGTGAATCCCTTACACTGTCCTGAGCATACTCTTCTTTTTTGGTGGTT TACCAGGGAACTGTTGCTGTTACGGCACCTGTGGTACCTATTTCAGCACAATTGAAGTATAACATTGATGTTGTGTGTGA ATATATTGTGAAAAAGATCCCAATCCCCGAAAGGAACTTCATTTCTCCACCAAATATGATATTAATTCGATCATTTGATG TCAATAAACCTGGTTATGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGTAATTCTTTTTCTG GTCCATTTCCCAAATATAATTCTTCATTTGCACGACGAACTTGCAGATGTTAATATTTTTAATGGTTGGAATGATTCTAC TGTAGAATTTGAAAGTGTTTGGCGAATAATGCCAATTGCCAAGGGTGAGCCCTATTATACATGGATTCTTAATCAATGAG TAATACACGGCCTTCAATTTGTTGAATCTTTTTCTATTTTTGAAAACTTATTTACACATGTAATTTTTCAGAATACATGG AACATTGTATGCCATTCTGTTGACAAACAGAATGTCAGTATTTTGGTGTTTGGAATGATATCTGCCTTTACATTTATATG TATAATTTTTAAAATGTTAAGTCTGCTGTAGATTTTTGAAGTGTATGTTGTGTGCTTTATAATACATGGATGCTTAATGA ATGAGAAGCAAGTGGCCTTCTAATTTGTTGATTTTTGTTTTGGAAACTCTTGATGCATGTTATTTTCCAAAACTTTTACA GGGTGTAAAGCAAAGCTGACAATTTGTATTTTACAGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGGTT AATTGGTAAAGATGTGAATGGAAACATTCAATGCACACCCATATACTCCAGGATAGTTTCATTGTACGCTGAACAAAATG AGCTTCAATTTGCTGTGCCTGGAGGCCTTATTGGTGTTGGGACCACGATGGATCCTACTTTGACGCGTGGTGACCAGTTG GTAGGGCATATTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTAGGTGGTTATTTAGTTCATAA TGACAAGTGGGGATAAATAACTTGCCTTTCAAAATATCTTCGTTATTCATTTTTACTTGTGTGTTAAGCTTCCTTGTCAT GACTTGCGAGAGAGATGACATTCAGTTCTCCTGTTGCTGGAAAAACTTTATTTGTAGATGAATTGGTGACTTGGTATTGC AGGTTAACTTTTTCTTGCTTCGGCGGCTTCTTGGTGTCCGAACAAAAGGCTCAGAGAGACAGGAAAAGGTAGCTAAGCTG ACCAAAGGAGAGCCGCTACTGTTGAACATTGGATCAATGTCAGCAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGC TAAATTGCAACTCACTACCCCTGTGTGTACTAGCAAGGGTGAGAAGATCGCACTTAGTCGACGTGTCAAGAAGCTTTGGC GTCTTATCGGGTGGGGTCAAATTCAAGCCGGAATCACTCTTGATGTCCCTCCTGCCCCTGCACTGTGTTGAAATACAAAC ACCAGTTATAGAAACGTGAGATGAATTTAGGTATATGGGAAGGGAGACAATTATTTAACTTTCATAAACAAGTTTGTTTA TGTTGTGTTGTGAGACACCTGTTGTGTTGTTAGAGAAGAGAGCTGATAAATTATTTTGAACATTTAGAAGTAATTTAGTT ATTGTGAACAAATGAGGATGGTGAAGTGGGGGAATGGAAGCCGTAGTTTTGCCCCTCACTTGTTGGACTAAGCATTAAAA AAACATTGAATTTTATTTTAATTTTATCAATATTTCAAAAGCTTAATTGTACTTTTATAGTCTCATAAATTTACAAACTC ATGATTATAGCCGTCTAGTTTCAACCGCTCAAATTAAATATATCAATATTCAAAATTGAATAAATATGTTCAAGAGAAAG CCAAAGGTG
CDS sequence (LotjaGi5g1v0145300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACGGAAGGGTTTGATGGAACAAGACCTGAGTAAGTTGGATGTGTCAAAATTGCATCCACTTTCGCCTGAAGTCAT ATCTCGGCAAGCTACTATTAATATTGGCACCATAGGCCATGTGGCCCATGGAAAGTCAACCGTTGTGAAAGCAATATCAG GTGTTCAGACCGTGCGTTTTAAAAGTGAGTTGGAACGCAACATTACAATAAAGCTTGGCTATGCAAATGCAAAAATATAT AAATGTGAAGATGCACGGTGTCCGAGGCCTATGAGCTACAAGGCTTATGGAAGTGGGAAGGAAGATGCTCCTATGTGTGA AGTACCAGGGTTTGAAAACTGCAGGATGAAATTGTTGAGACATGTTTCTTTTGTCGATTGCCCGGGACATGATATTCTCA TGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATTGCTGCTAATGAAAGCTGCCCTCAACCT CAAACTTCTGAGCATTTAGCTGCGGTTGAAATTATGCGTCTGCAGCACATTATAATCCTTCAGAACAAGGTAGACCTAAT CCCAGAAAACGTGGCAATCAATCAGCATGAAGATATTCAGAAGTTCATTGCAGGAACTGTTGCTGTTACGGCACCTGTGG TACCTATTTCAGCACAATTGAAGTATAACATTGATGTTGTGTGTGAATATATTGTGAAAAAGATCCCAATCCCCGAAAGG AACTTCATTTCTCCACCAAATATGATATTAATTCGATCATTTGATGTCAATAAACCTGGTTATGAGGTTGATGAAATAAA AGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGGTTAATTG GTAAAGATGTGAATGGAAACATTCAATGCACACCCATATACTCCAGGATAGTTTCATTGTACGCTGAACAAAATGAGCTT CAATTTGCTGTGCCTGGAGGCCTTATTGGTGTTGGGACCACGATGGATCCTACTTTGACGCGTGGTGACCAGTTGGTAGG GCATATTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTTAACTTTTTCTTGCTTCGGCGGCTTC TTGGTGTCCGAACAAAAGGCTCAGAGAGACAGGAAAAGGTAGCTAAGCTGACCAAAGGAGAGCCGCTACTGTTGAACATT GGATCAATGTCAGCAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGCTAAATTGCAACTCACTACCCCTGTGTGTAC TAGCAAGGGTGAGAAGATCGCACTTAGTCGACGTGTCAAGAAGCTTTGGCGTCTTATCGGGTGGGGTCAAATTCAAGCCG GAATCACTCTTGATGTCCCTCCTGCCCCTGCACTGTGTTGA
Protein sequence (LotjaGi5g1v0145300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRKGLMEQDLSKLDVSKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKSELERNITIKLGYANAKIY KCEDARCPRPMSYKAYGSGKEDAPMCEVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQP QTSEHLAAVEIMRLQHIIILQNKVDLIPENVAINQHEDIQKFIAGTVAVTAPVVPISAQLKYNIDVVCEYIVKKIPIPER NFISPPNMILIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGLIGKDVNGNIQCTPIYSRIVSLYAEQNEL QFAVPGGLIGVGTTMDPTLTRGDQLVGHILGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQEKVAKLTKGEPLLLNI GSMSAGGKVIAVKNDLAKLQLTTPVCTSKGEKIALSRRVKKLWRLIGWGQIQAGITLDVPPAPALC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 463 | 463 | 8.2E-296 | – | |
| PANTHER | 1 | 463 | 463 | 8.2E-296 | – | |
| SUPERFAMILY | 30 | 236 | 207 | 6.85E-39 | ||
| ProSiteProfiles | 30 | 239 | 210 | 34.924 | ||
| Gene3D | 30 | 240 | 211 | 1.6E-63 | – | |
| Pfam | 32 | 236 | 205 | 1.2E-22 | ||
| CDD | 33 | 240 | 208 | 3.25345E-131 | – | |
| PRINTS | 34 | 47 | 14 | 2.2E-11 | ||
| PRINTS | 123 | 133 | 11 | 2.2E-11 | ||
| PRINTS | 139 | 150 | 12 | 2.2E-11 | ||
| PRINTS | 177 | 186 | 10 | 2.2E-11 | ||
| SUPERFAMILY | 240 | 354 | 115 | 8.11E-35 | ||
| CDD | 241 | 354 | 114 | 2.72217E-60 | – | |
| Gene3D | 241 | 356 | 116 | 9.8E-48 | – | |
| Pfam | 268 | 340 | 73 | 1.8E-8 | ||
| SUPERFAMILY | 355 | 452 | 98 | 3.79E-29 | ||
| Gene3D | 357 | 456 | 100 | 8.7E-37 | – | |
| CDD | 357 | 451 | 95 | 3.85106E-44 | ||
| Pfam | 362 | 451 | 90 | 3.4E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0145300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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