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Lj2g3v1728750.1

Overview

Field Value
Gene ID Lj2g3v1728750
Transcript ID Lj2g3v1728750.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502161240|ref|XP_004512090.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 23 553 531 1.60E-300
PANTHER 23 553 531 1.60E-300
Gene3D 86 188 103 5.10E-31
SUPERFAMILY 98 308 211 1.07E-64
ProSiteProfiles 130 309 180 24.618
Pfam 136 271 136 2.60E-32
Gene3D 189 304 116 9.10E-32
SUPERFAMILY 283 553 271 2.13E-51
Pfam 312 551 240 5.10E-58
Gene3D 512 551 40 6.30E-08

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Molecular function Flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Molecular function FAD binding Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.

Expression data

Expression pattern

Expression pattern of Lj2g3v1728750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1728750.1, powered by CORGI.

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