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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018150
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0000769.1
n.a. PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1| chr0 328159 328683 -
2 domain predictions
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Lj0g3v0190569.1
n.a. PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356533832|ref|XP_003535462.1| chr0 93148434 93153071 -
2 domain predictions
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Lj0g3v0296079.1
n.a. Asparaginyl-tRNA synthetase [Medicago truncatula] gi|357513179|ref|XP_003626878.1| chr0 153863335 153873524 +
2 domain predictions
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Lj0g3v0358409.1
n.a. PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502162327|ref|XP_004512467.1| chr0 188656300 188660287 +
2 domain predictions
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Lj2g3v0878960.1
n.a. PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356504551|ref|XP_003521059.1| chr2 13523356 13534951 +
2 domain predictions
 –
Lj2g3v3106130.1
n.a. PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502125110|ref|XP_004498802.1| chr2 39971149 39975627 +
2 domain predictions
 –
Lj3g3v2656760.1
n.a. PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1| chr3 32326609 32330106 +
2 domain predictions
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Lj4g3v1259110.1
n.a. PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502152388|ref|XP_004508904.1| chr4 18504755 18513486 -
2 domain predictions
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Lj4g3v1259110.2
n.a. PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502152388|ref|XP_004508904.1| chr4 18504755 18513486 -
2 domain predictions
 –
Lj4g3v2120450.1
n.a. PREDICTED: lysyl-tRNA synthetase-like [Glycine max] gi|356533832|ref|XP_003535462.1| chr4 29030056 29034971 +
2 domain predictions
 –
Lj4g3v3020560.1
n.a. PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi|502138744|ref|XP_004503515.1| chr4 40552556 40555467 -
2 domain predictions
 –
Lj4g3v3109640.1
n.a. PREDICTED: aspartate--tRNA ligase-like isoform X1 [Cicer arietinum] gi|502138374|ref|XP_004503382.1| chr4 41361493 41370376 -
2 domain predictions
 –
Lj4g3v3109640.2
n.a. PREDICTED: aspartate--tRNA ligase-like isoform X1 [Cicer arietinum] gi|502138374|ref|XP_004503382.1| chr4 41361493 41367484 -
2 domain predictions
 –
Lj5g3v0508080.1
n.a. PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502125110|ref|XP_004498802.1| chr5 4993524 4998002 -
2 domain predictions
 –