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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3106130 |
| Transcript ID | Lj2g3v3106130.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502125110|ref|XP_004498802.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | – | – | |
| PANTHER | 12 | 541 | 530 | 2.20E-276 | ||
| PANTHER | 12 | 541 | 530 | 2.20E-276 | ||
| Coils | 20 | 40 | 21 | – | – | |
| SUPERFAMILY | 58 | 186 | 129 | 1.08E-26 | ||
| Gene3D | 58 | 186 | 129 | 1.30E-38 | – | |
| TIGRFAM | 88 | 541 | 454 | 8.10E-138 | ||
| CDD | 94 | 193 | 100 | 6.80E-41 | – | |
| SUPERFAMILY | 212 | 540 | 329 | 4.98E-95 | – | |
| CDD | 213 | 537 | 325 | 1.66E-166 | – | |
| Gene3D | 213 | 540 | 328 | 5.10E-117 | – | |
| Pfam | 216 | 534 | 319 | 1.00E-76 | ||
| ProSiteProfiles | 236 | 533 | 298 | 18.99 | ||
| PRINTS | 286 | 298 | 13 | 2.90E-22 | ||
| PRINTS | 303 | 316 | 14 | 2.90E-22 | ||
| PRINTS | 456 | 472 | 17 | 2.90E-22 | ||
| PRINTS | 496 | 510 | 15 | 2.90E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Aspartate-tRNA ligase activity | Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Aspartyl-tRNA aminoacylation | The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA. |
Expression pattern of Lj2g3v3106130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3106130.1, powered by CORGI.
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