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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0358409 |
| Transcript ID | Lj0g3v0358409.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502162327|ref|XP_004512467.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 105 | 105 | 1.72E-30 | – | |
| SUPERFAMILY | 1 | 61 | 61 | 2.69E-11 | ||
| PANTHER | 1 | 60 | 60 | 3.60E-219 | ||
| PANTHER | 1 | 60 | 60 | 3.60E-219 | ||
| Gene3D | 1 | 98 | 98 | 2.10E-18 | – | |
| PANTHER | 81 | 415 | 335 | 3.60E-219 | ||
| PANTHER | 81 | 415 | 335 | 3.60E-219 | ||
| CDD | 114 | 411 | 298 | 2.03E-150 | – | |
| SUPERFAMILY | 114 | 414 | 301 | 4.79E-87 | – | |
| Pfam | 115 | 408 | 294 | 1.90E-69 | ||
| Gene3D | 115 | 414 | 300 | 2.60E-107 | – | |
| ProSiteProfiles | 118 | 407 | 290 | 18.044 | ||
| PRINTS | 160 | 172 | 13 | 1.10E-22 | ||
| PRINTS | 177 | 190 | 14 | 1.10E-22 | ||
| PRINTS | 330 | 346 | 17 | 1.10E-22 | ||
| PRINTS | 370 | 384 | 15 | 1.10E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Aspartate-tRNA ligase activity | Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Aspartyl-tRNA aminoacylation | The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA. |
Expression pattern of Lj0g3v0358409.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0358409.1, powered by CORGI.
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