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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0556500 |
| Transcript ID | LotjaGi1g1v0556500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108857917..108866016) extracted from Lotus japonicus Gifu genome v1.2.
GTTACTCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGGTGAACTCTAATATGCACAT GGTCACACTTATTTAAAAAGATTTATATATTTATGGTTAGAATGTGATTCTCTCTTTTTTCCCTTAATCCAAACAAGATA AAAATAAAATCATTTTCCACTTATATTACTTTCTCCTGTCTACAGCGAACCAAACAGAGCATATAAGTAAACAGGTTGAA GTTAATTGGCTGTACTGTGAGGTGAGGAGAAGCCAGAGGAGAGTATAAGAGAGGCTTTGGTTTGGATTGGGTGGTTGCTT ATCCGTTATTCCACCGCGAGTTGGTGGTTGTGGTTGTCATGGAAGGTTTAGCGTTTCAACTGTTGCACATTCCAAAACTT GCTCTTCTTCCGACCACTCTTACTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGATTTCTCTCGCCCAAACAACAAATACT ACTACTACCTCGACCTCGACATCGTTTTCGCTTTCGCTTTCGCACATCATCGAATTCGCAGGCACAGTCCCTTCCTGAAG AACAAGAACAAGAACAAGAAGAGTTGCTCACAGTGAGTGGAGATTCCATTCGTGACAGGTTTCTCCGTTTCTATGCTTCC CGTGGTCACAAGGTTCTTCCCAGTGCTTCTCTCATCCCAGATGATCCCACCGTCCTCCTCACTATCGCTGGCATGCTTCA GTTCAAGCCTATCTTCCTAGGCAAGGTAAGCACCAGGTATGCTAATTGCTTCATTCATTGCTTTTCTTATCCATTTACTT CTTCTCTTAGTCTTACCACCATCACCAATCATTCATTCCAACCGAGCTAAGTGGTAAGTAAGAGCTAGGGGGCATAACGG TTGAGTGAGATAAAGGGTGAAGGGTCCGGTGTTCGAACCCTGAGAATAGACTAATTTACTAACATTACTAACGACTAACA TTTGTCTATAAAAAAAACCAATCATTCATTCCTTCGTTTTCGTTGATTTAGATTCCCAGGCAAGTATCTCGTGCTACTAC TTCTCAAAGGTGCATACGTACTAACGATATCAACAACGTTGGCCTTACTTCTCGACATCAAACCTTTTTTGAGATGCTTG GTAACTTCAGCTTTGGTGATTACTTCAAAAAACAAGCTATTCAATGGGCATGGGAGCTCTCTACCTTAGAGTCAGTATTT TCATTTTGCTTCTATTCTATTCCATTTATGCAGCATACATCTTTCCTTGTCTTCATATCCTCACTCAATCACTGTCTTTG TCTTTTAGGTTTGGTCTCCCACCAGACAGATTATGGATTAGTGTTTATGAAAATGATGATGAGGCTTTTCACCTCTGGTC TCATGAGGTTACCTCAAATTCCATCAATCATCTTATTTTCCCTCCCTATGGCCTTTGATATTAATTGGCTCTGCTCTGTG CAGGTCGGTGTCCCCGTTGAGCGTATAAAGAGGTTGGGTGAAGAGGACAACTTCTGGACTAGTGGAGTTACAGGTCCCTG TGGCCCTTGCTCAGAAATTTATTATGATTTTCATCCTGAGAGGGGATACATGGATGCTGTGAGTATGATTTAGTTTGAGA TTTTGTTATTCTAAATCATTTCAATGACTGGTGTTTTCCCATCTTTTACATATTGGGGGATGAAAGCAGGATCTTGGTGA CGATACCAGATTTATAGAGTTCTACAATCTAGTATTCATGCAATACAACAAAAAAGATGATGGTTCTCTTGAACCTCTAA AGCAGAAGAACATAGATACTGGACTTGGATTGGAGCGTATGGCTCGCATTCTTCAAAAGGTATACAAGGATTTCACTTGT TTTGAAAGTTAACATTTATGTTGCTCTACAACTATTTCTACCTCTCACTAGAACTGTCGTTTCATTTGCTCCTCAAGTCC TTTTTATATTTATTCAGTGTATACTGCAGGTTCCCAACAATTATGAAACTGACTTGATTTTCCCCATCATAGAGAAGGCC TCTGAATTGGCAAATGTTTCGTATAGCATTTCTGATGATCTTACAAAGAGAAATCTGAAAGTAAGTATGATTATCTCCAA ACAAGGTACAATTTTCAATAGCTTATTTCAACCATATTTCTTATTACTTTTATGTATTATCATTTCTTTTTCTTTTTTCA ATTTATCTAGATTATAGGAGATCACATGCGTGCAATTGTGTTTCTCATCTCTGATGGTGTTGTCCCATCAAATGTGGGGA GAGGTTATGTTGTTCGGCGGCTTATCAGAAGGGTTGTTCGTACAGGCAGGTTGCTTGGTATAAAGGGTGATGGTAAAGGA GACCCTGAAGGAGCATTTGTACCTATTATTGCTGAGAAAGTAGTGGAGTTGAGTACACACATTGATGCTGATGTGAAAAA CAGATCACCCCGTATCCTTGAGGAGTTAAAGAGAGAAGAGCTTCGGTTTGTGCAGACCCTAGAGAGAGGAGAGAAGTTGC TTGAGGAGAAGCTTGCTGGTGCTTTATCAAGTGCCGGAAGAAATGGAACTGTACCTTGCCTAGCTGGTGAAGATGTGTTC CTTTTGTACGATACTTATGGATTCCCAATGGAGATCACAAAAGAAGTGGCTGAAGAACGTGGCGTGAGTATTGATATGAA TGGCTTTGAGATGGAGATGGATAAGCAAAGGCGTCAATCTCAAGCTGCACATAATACTGTCAAACTTTCCATTGGAAATG GGGCAAATATTGCAGAAAATGTACCTGACACTGAATTTATTGGGTATGACAGTCTTTATTGTAAAGCAATTGTAGAAAGC CTGGTGGTAAATGGTGATCCAGCTGTGCAGGTTAGTGAAGGGAGTAATGTGGAAATTTTGCTGAACAAGACTCCATTTTA TGCTGAATCAGGGGGACAAATTGGAGATCATGGTTTTCTATATATTTCAGGGGATGAGAATCAACAAAAAGCTGTTGTAG AGATAATAGATGTTCAGAAATCTTTAGGTAACATATTTGTTCACAAGGGTACAGTCCGAAAGGGTGTTGTGGAGGTTGGA ATAGAAGTGGAAGCAGCAGTGGATGTAAAGCTGAGGCACCGTGCTAAGGTACAAGAATTGCAAGCTTACCATTTCATTTA CTTGTCTGGTGAATCCTTGCTCATAAAATTTGATAAAGATAAATCTTTACATCATCATAGTTCCAAGTTTCAAGCTTACA AGCTCAAGATTATGGTAAATGGAATTGGTGCTTTGTAGGTTCATCATACTGCTACTCATTTACTACAAGCTGCTCTTAAA AAAGTCATTGGTCAGGAGACCTCGCAAGCTGGTTCTTTGGTGGCATTTGATCGTCTGAGATTTGATTTCAACTTCCACCG ACCACTTCTCGACAGTGAGCTTGCAGAAATAGAAGTGCTGATCAATGGATGGATTGAGGATGCGGTACTTCTTCAAACTA AAGTGATGCCTCTTAGTGATGCAAAAAGAGCTGGAGCTATTGCAATGTTTGGAGAAAAATATGGAGAAGAGGTAGTATTA TACTACACAAACTTTTTTATATTGAACTTTATTGTTCAATTGATTATGAATAACTACCTCTTGACAATCAGGGAAAGGAT TATAAATATATATATATATATATATGATATTTTCTTTTTAGTTGATATGGTGTGTACAGCCTCTTGTAGCCTTCAAACTT TGTGTGCTGCAGGTACGTGTTGTAGACGTTCCTGGTGTATCACTTGAACTTTGTGGAGGGACTCATGTCGGTAATACTTC TGAAATTCGTGGTTTTAAAATAATCTCAGAGCAGGGTATTGCATCTGGAATAAGGCGTATAGAAGCTGTAGCTGGGGAAG CTTGCATTGAATATGTCAATTCTCGAGATTTTTATCTCAAGCAACTATGTTCCACTCTCAAAGTATGTTCATGATCTTTG GCTCTTCACAATCCTGCTTAAGTTTTGGATATCTATTATCCAATTTCTAGAGAACCAATTAATATTCATTGTCATCTACA TGGACCATAGTTTTTTTGTCGTGTTAATATCCATGTGTCATAAGACTAATGTAGCCAGTTTTTAATTATATAAATGTGTG AACGTAAGCATTCTTTTGTTTACCTATTTGTGATGAACAAATTTAGAGATACAATGCTCAATGGTAAATGGGAAAGGGTT ATCCTAAGTCTTGATCCTAATATCCTATAACTCTGTAGACTTTCCTAGCGATGAAAGAAAAGACCATATTTTGCACAAGA TAGCCATTGATCATAACCTGGAAGAAAGAAGCACATGTTACTAAAATACCTGGGTATTTGCATTTCCTTTATGCCTTATA AGGATTAACTTGTTGTTTCATTATGGATTAAGCATGCCAGATAATGAACTTTCTGACCGTCTTAAGTGGTTGTATATTTG GGGTCATTATTGCATATGTTGCTCAAATACTTAGTATTTCCTTTATGTCTATAATCTTTATTCTATTTTCTTAATAAAAT AAATATAGCCGGGTTTGGTTGACTTGATCATTTTCTGCATATGCCATTTCTTCAATCACTTTTAATCACCTTATGAAGGT TAAACCTGAAGAGGTAACGGCAAGGATAGAAAACCTTTTAGAGGAGTTGCGTATAGCAAGAAATGAAATTTCTGCTATGC GTGCAAAAGCAGCAGTCTACAAAGCTTCGGCTATTGCAAGCAAGGCATTGTTGATCGGGAATTCAAAACAGTACAGGTAA TATTTCTCCATATTGTTGTATATGTTAATATATCATTTGGGAGAGGACTGGCTTTCTCCCTTGCTAACAGCCTGAAAAAT CTTTTCTGGTGACACAATTTAATATTACTAAGGTGTACTAACTACTGTATATAACTCAGGGAGAAGGTGAATGATGTTTT CTTTGATATATAAGTCTTTCAACTTTTGAACATTTAAGTTTATCATGTCGTGACAATTAAGAAGCAGAGGTGTTGTGTCA TATAATTGATTGTTATATTTCTGTGAATGCCCACAAATAACCAGAAATTGACATGATGTTCTTTGTATGTATATTTCCAT ATCTTGTTCAAAGTTGGTAGGACTAAAAAGAAATCTTCGAAAATTAATTAATCGATTGATCATTTGATTAGATGTGAAAT CTTTATTTATCTATTGAAATTTCAGAGTACTAGTTGAGTGTTTGGATGATGTGGATGCTGAGTCACTTAAAAGTGCCGCA GAATATCTAGTGGAAACACTAACAGATCCAGCAGCTGTTGTACTGGGCTCATGTCCAGGTGAAGGGAAGGTTAGTCTAGT GGCTGCTTTTACTCCAGGGGTGGTTGATCGAGGGATTCAGGCAGGTAAGTTTATTGGGCAAATAGCAAAGTTATGTGGTG GCGGCGGAGGTGGAAGGCCTAATTTTGCTCAGGCTGGTGGGAGGAAGCCTGAAAACTTGACCAGTGCTCTCGAGAAGGCA AAATCCGAGCTGATAGCTACTCTATCTGAAAAATGAAACTGAATTCAAATACACCAGGCAAATATTTTCATGCTAGAAGA ACAGAAGATATTGATTCTTTTTCTGAGGACTAGAACTCAAGTAACGATGTTATTTCCAATAATGGGAGGCTTATAATGGA AGATTCAAAGTGGTGGAGCTCTTGTAAAATGTTGGCTATCCTTGTGACTTTATTCTTCTGAGATCTGATCCAACTTGTAG TTTTTTGGCATGCGCTCAAATTGGATGCAGGACTTTATAATTTTTCACAGTACATGAATGGAAGCTAAGTGTACTTACGC CTTTTTTTCTTGATATTACAGCTAAAGACTTCATATCTAATGGTTTGAAGGTCCAGTAACATAAACATAAATTAGCTTGA ACAACTCTTTACGAAAAATTCTGATTTATTTTCGATGAGTGAAGAGGGCTCACGCCCAAGCAACATAAAGAAACATAAAA ACTCCTATAACAGTATAACCCTCTACGATAAATTGTAGCAACACAATATAATAAAAAAGAGACATAACAAAAAGCTGGAA GAAACTCAAGCTTTCATGGGGATAGACAAGGATAAGTCATGTTTAGTAAATGCATTCACAACCGTGTTAGCTTCTCTAAA GGTATAGCTCGAGCTAATAGCAACAAATCTTCTTAGGAGAGATTCAATCAAATGAATCAAAACAGCACAAGAATGAGAGT TCCCACAACCCATCTCATAAGGAGAATCAGACTCAATAAACATCTGCTGATAACCAATCTCTTCCAACAACCTCAAATAT GTTAAAATCCCTTAAAGTTCAGCATGTAAAGCAGTACACGTGGCCAACATACTGGAAAACGCAAGAACAAAAGCACCGAA ATGTTCCCAAACTATTCCACCACAAGCTACTATATTTGTTGACGAAGAAAAAGCACCATCAAATTAAGCTTTACCAAATC TTCATCCTAAGGGGGGATCAACGAATGCCATAAAATTTGGACAAGTTCCCCCTAACACAATTTACAAGTGACTTCCATAT AGTCTTTTTAATGATACACACATTAGCCATAATCTCATTGCACATATTAATAAGACTTGCTAAGGTATCATTAAAAAACA AGTGTTCCTACGCTTCAACACGGAAACCAAGGTAACACTAAAACTAAATTTCACTCAACACACCAGTTATGTTCGAAGTA TCCAACACATTCTCTCTAACAAGAATTCTTAACAAAAGAAGACAACTAGCTCGTCATTCGGAAAAAGCTTACACCAAATA GACTTTTCAAGAGGATAATTTCAAAAGACATGATCCACACACACTGCCTTAATGCGACACATACAACATCAATATCAGAT GTCTATATAATCAAAGCACATTAGTGGGAAGGCCATTATTAGCAAAACGCTAAATAATGCATTTCACAAGAGGAAATGGG GGTGAGGGTAAAGGGTGAGGAGAAGATTCTAGTGAGTGTTTGGCATAACTGCTTATAACAAGATTCTTAACAAAGGAAGG TTCATATTTTACTGCAGCGTATTAGGCGTTTCCCATGAGGTAATGAAAAAAAAAGATTGATGCTTAAATAGTTGCAATTG AGTATAAGAATTTTTAAAAGGCATTAACGAAACTACAAAATTTTGAACTAAGTCTTTGACAACAAATAGTGCATGAAAGA AACTAGGCACTCAACTATTACATTTTCATGCAACAGGGACCTCGATATCACTTGCCGAAACAGCAGCAGGCTGAATGTAT TCGTCTTCCTCCTTCGGAGAGTGGATTGTAACAATATCAGGGAGGGGAGTTTTAGGACCCTGTTTCCCTTTAGGATCCCA GTCAAGCATAATCTTAACCTTGATACCAAGTACACCCTATTAGATAGTAAGAAAAATTATCAGTACCATCACTGCATAAT TGAAAAAAATGAGCTTGAAAATACTAGGGCCAGAAAAACTTCTAATTAGGTATCTACGAAGTGAAGCAAACCTGTCTGAG GAGCACATGTCTCACTGCAGAGTCAATGTAATCCTTGACTGGTTGCCCAGAAGAAATCATGTACCCATCCTTGAACTTCA TAGATTTGGCTCTCTGTGCTCTCAGTTTTCCACTAACAATCACCTGCTCAAATTACAAAAGCAATTGCAAGCAGGTCATT ACTTGAAGCAATACAAAAAAATAGGAGTTCAAAGCTGCTTCTGTAGAACAAACCTCACATCCCTTGGCTCCACTTTCCAT AACAAATCTCAAAACACCATAGCAAGCCCTGCAACAAAAAAGCATGAGACATGAATTGTAAGTAATATGACCATAAACAC AAGCATTGTATTCAAGCAGATTAAAACAGAAAGTGTTAAAAAAACCAGTACTCAAGAACACACCGCCACACATAATATAA CATAGTGTTTGGTTGGAGGGGACTGGAAGGGAAAGGAGGAGGAGAGGGGTTTTCTAAAACTTATTTGGTTCAATTTTAAG GAGGGGAATGGAGAGGGGTGAAACCCCTCATAACTCAATTTTGCATCCCCTCCAAATGTGGGGTGGGGGAATTGAAGGGT AAATATTTCATGAAGTAATGTAACTTTGTTTTAAAATCCTTCCCCTCCCATCATGAACCACAAAAGAAAGGGGTTATGTC CCCTCACCTCCTCTCCCCCC
CDS sequence (LotjaGi1g1v0556500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGTTTAGCGTTTCAACTGTTGCACATTCCAAAACTTGCTCTTCTTCCGACCACTCTTACTTCTTCTTCTTCTTC TTCTTCTTCTTTTGGATTTCTCTCGCCCAAACAACAAATACTACTACTACCTCGACCTCGACATCGTTTTCGCTTTCGCT TTCGCACATCATCGAATTCGCAGGCACAGTCCCTTCCTGAAGAACAAGAACAAGAACAAGAAGAGTTGCTCACAGTGAGT GGAGATTCCATTCGTGACAGGTTTCTCCGTTTCTATGCTTCCCGTGGTCACAAGGTTCTTCCCAGTGCTTCTCTCATCCC AGATGATCCCACCGTCCTCCTCACTATCGCTGGCATGCTTCAGTTCAAGCCTATCTTCCTAGGCAAGATTCCCAGGCAAG TATCTCGTGCTACTACTTCTCAAAGGTGCATACGTACTAACGATATCAACAACGTTGGCCTTACTTCTCGACATCAAACC TTTTTTGAGATGCTTGGTAACTTCAGCTTTGGTGATTACTTCAAAAAACAAGCTATTCAATGGGCATGGGAGCTCTCTAC CTTAGAGTTTGGTCTCCCACCAGACAGATTATGGATTAGTGTTTATGAAAATGATGATGAGGCTTTTCACCTCTGGTCTC ATGAGGTCGGTGTCCCCGTTGAGCGTATAAAGAGGTTGGGTGAAGAGGACAACTTCTGGACTAGTGGAGTTACAGGTCCC TGTGGCCCTTGCTCAGAAATTTATTATGATTTTCATCCTGAGAGGGGATACATGGATGCTGATCTTGGTGACGATACCAG ATTTATAGAGTTCTACAATCTAGTATTCATGCAATACAACAAAAAAGATGATGGTTCTCTTGAACCTCTAAAGCAGAAGA ACATAGATACTGGACTTGGATTGGAGCGTATGGCTCGCATTCTTCAAAAGGTTCCCAACAATTATGAAACTGACTTGATT TTCCCCATCATAGAGAAGGCCTCTGAATTGGCAAATGTTTCGTATAGCATTTCTGATGATCTTACAAAGAGAAATCTGAA AATTATAGGAGATCACATGCGTGCAATTGTGTTTCTCATCTCTGATGGTGTTGTCCCATCAAATGTGGGGAGAGGTTATG TTGTTCGGCGGCTTATCAGAAGGGTTGTTCGTACAGGCAGGTTGCTTGGTATAAAGGGTGATGGTAAAGGAGACCCTGAA GGAGCATTTGTACCTATTATTGCTGAGAAAGTAGTGGAGTTGAGTACACACATTGATGCTGATGTGAAAAACAGATCACC CCGTATCCTTGAGGAGTTAAAGAGAGAAGAGCTTCGGTTTGTGCAGACCCTAGAGAGAGGAGAGAAGTTGCTTGAGGAGA AGCTTGCTGGTGCTTTATCAAGTGCCGGAAGAAATGGAACTGTACCTTGCCTAGCTGGTGAAGATGTGTTCCTTTTGTAC GATACTTATGGATTCCCAATGGAGATCACAAAAGAAGTGGCTGAAGAACGTGGCGTGAGTATTGATATGAATGGCTTTGA GATGGAGATGGATAAGCAAAGGCGTCAATCTCAAGCTGCACATAATACTGTCAAACTTTCCATTGGAAATGGGGCAAATA TTGCAGAAAATGTACCTGACACTGAATTTATTGGGTATGACAGTCTTTATTGTAAAGCAATTGTAGAAAGCCTGGTGGTA AATGGTGATCCAGCTGTGCAGGTTAGTGAAGGGAGTAATGTGGAAATTTTGCTGAACAAGACTCCATTTTATGCTGAATC AGGGGGACAAATTGGAGATCATGGTTTTCTATATATTTCAGGGGATGAGAATCAACAAAAAGCTGTTGTAGAGATAATAG ATGTTCAGAAATCTTTAGGTAACATATTTGTTCACAAGGGTACAGTCCGAAAGGGTGTTGTGGAGGTTGGAATAGAAGTG GAAGCAGCAGTGGATGTAAAGCTGAGGCACCGTGCTAAGGTTCATCATACTGCTACTCATTTACTACAAGCTGCTCTTAA AAAAGTCATTGGTCAGGAGACCTCGCAAGCTGGTTCTTTGGTGGCATTTGATCGTCTGAGATTTGATTTCAACTTCCACC GACCACTTCTCGACAGTGAGCTTGCAGAAATAGAAGTGCTGATCAATGGATGGATTGAGGATGCGGTACTTCTTCAAACT AAAGTGATGCCTCTTAGTGATGCAAAAAGAGCTGGAGCTATTGCAATGTTTGGAGAAAAATATGGAGAAGAGGTACGTGT TGTAGACGTTCCTGGTGTATCACTTGAACTTTGTGGAGGGACTCATGTCGGTAATACTTCTGAAATTCGTGGTTTTAAAA TAATCTCAGAGCAGGGTATTGCATCTGGAATAAGGCGTATAGAAGCTGTAGCTGGGGAAGCTTGCATTGAATATGTCAAT TCTCGAGATTTTTATCTCAAGCAACTATGTTCCACTCTCAAAGTTAAACCTGAAGAGGTAACGGCAAGGATAGAAAACCT TTTAGAGGAGTTGCGTATAGCAAGAAATGAAATTTCTGCTATGCGTGCAAAAGCAGCAGTCTACAAAGCTTCGGCTATTG CAAGCAAGGCATTGTTGATCGGGAATTCAAAACAGTACAGAGTACTAGTTGAGTGTTTGGATGATGTGGATGCTGAGTCA CTTAAAAGTGCCGCAGAATATCTAGTGGAAACACTAACAGATCCAGCAGCTGTTGTACTGGGCTCATGTCCAGGTGAAGG GAAGGTTAGTCTAGTGGCTGCTTTTACTCCAGGGGTGGTTGATCGAGGGATTCAGGCAGGTAAGTTTATTGGGCAAATAG CAAAGTTATGTGGTGGCGGCGGAGGTGGAAGGCCTAATTTTGCTCAGGCTGGTGGGAGGAAGCCTGAAAACTTGACCAGT GCTCTCGAGAAGGCAAAATCCGAGCTGATAGCTACTCTATCTGAAAAATGA
Protein sequence (LotjaGi1g1v0556500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGLAFQLLHIPKLALLPTTLTSSSSSSSSFGFLSPKQQILLLPRPRHRFRFRFRTSSNSQAQSLPEEQEQEQEELLTVS GDSIRDRFLRFYASRGHKVLPSASLIPDDPTVLLTIAGMLQFKPIFLGKIPRQVSRATTSQRCIRTNDINNVGLTSRHQT FFEMLGNFSFGDYFKKQAIQWAWELSTLEFGLPPDRLWISVYENDDEAFHLWSHEVGVPVERIKRLGEEDNFWTSGVTGP CGPCSEIYYDFHPERGYMDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLI FPIIEKASELANVSYSISDDLTKRNLKIIGDHMRAIVFLISDGVVPSNVGRGYVVRRLIRRVVRTGRLLGIKGDGKGDPE GAFVPIIAEKVVELSTHIDADVKNRSPRILEELKREELRFVQTLERGEKLLEEKLAGALSSAGRNGTVPCLAGEDVFLLY DTYGFPMEITKEVAEERGVSIDMNGFEMEMDKQRRQSQAAHNTVKLSIGNGANIAENVPDTEFIGYDSLYCKAIVESLVV NGDPAVQVSEGSNVEILLNKTPFYAESGGQIGDHGFLYISGDENQQKAVVEIIDVQKSLGNIFVHKGTVRKGVVEVGIEV EAAVDVKLRHRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDSELAEIEVLINGWIEDAVLLQT KVMPLSDAKRAGAIAMFGEKYGEEVRVVDVPGVSLELCGGTHVGNTSEIRGFKIISEQGIASGIRRIEAVAGEACIEYVN SRDFYLKQLCSTLKVKPEEVTARIENLLEELRIARNEISAMRAKAAVYKASAIASKALLIGNSKQYRVLVECLDDVDAES LKSAAEYLVETLTDPAAVVLGSCPGEGKVSLVAAFTPGVVDRGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPENLTS ALEKAKSELIATLSEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 63 | 976 | 914 | 0.0 | – | |
| PANTHER | 63 | 976 | 914 | 0.0 | – | |
| Hamap | 71 | 975 | 905 | 31.727 | ||
| Gene3D | 77 | 311 | 235 | 7.4E-98 | – | |
| ProSiteProfiles | 79 | 801 | 723 | 117.756 | ||
| Hamap | 80 | 973 | 894 | 159.154 | ||
| SUPERFAMILY | 81 | 315 | 235 | 1.37E-93 | – | |
| CDD | 82 | 311 | 230 | 1.58429E-129 | – | |
| Pfam | 84 | 646 | 563 | 3.0E-190 | ||
| TIGRFAM | 84 | 952 | 869 | 2.1E-292 | ||
| PRINTS | 147 | 158 | 12 | 1.8E-27 | ||
| PRINTS | 269 | 280 | 12 | 1.8E-27 | ||
| PRINTS | 296 | 309 | 14 | 1.8E-27 | ||
| SUPERFAMILY | 316 | 524 | 209 | 6.54E-47 | ||
| PRINTS | 347 | 363 | 17 | 1.8E-27 | ||
| PRINTS | 371 | 384 | 14 | 1.8E-27 | ||
| Gene3D | 531 | 644 | 114 | 5.3E-9 | – | |
| SUPERFAMILY | 539 | 644 | 106 | 2.47E-18 | ||
| SUPERFAMILY | 644 | 802 | 159 | 4.58E-42 | ||
| Gene3D | 655 | 789 | 135 | 4.0E-44 | – | |
| Gene3D | 716 | 769 | 54 | 4.0E-44 | – | |
| Pfam | 745 | 788 | 44 | 2.7E-17 | ||
| SMART | 745 | 788 | 44 | 4.5E-19 | ||
| Coils | 824 | 844 | 21 | - | – | |
| Pfam | 825 | 967 | 143 | 7.2E-21 | ||
| Gene3D | 861 | 970 | 110 | 1.2E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Alanine-tRNA ligase activity | Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Alanyl-tRNA aminoacylation | The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA. | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. | ||
| Biological process | TRNA aminoacylation | The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules. |
Expression pattern of LotjaGi1g1v0556500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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