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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019443
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.085s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0130999.1
n.a. SAB [Medicago truncatula] gi|357465183|ref|XP_003602873.1| chr0 59552618 59557624 -
2 domain predictions
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Lj3g3v0566030.1
n.a. Golgi-body localization protein domain isoform 3, partial [Theobroma cacao] gi|508723598|gb|EOY15495.1| chr3 6286486 6290287 -
2 domain predictions
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LotjaGi1g1v0135600.1
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A1J7HJJ7|A0A1J7HJJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0135600 LjG1.1_chr1 21856813 21892272 +
2 domain predictions
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LotjaGi1g1v0135600.3
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A0R0KZC9|A0A0R0KZC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0135600 LjG1.1_chr1 21856834 21892283 +
2 domain predictions
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LotjaGi1g1v0135600.5
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A1J7HJJ7|A0A1J7HJJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0135600 LjG1.1_chr1 21856868 21892424 +
2 domain predictions
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LotjaGi1g1v0342700.1
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|K7KU85|K7KU85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80490910 80525983 +
2 domain predictions
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LotjaGi1g1v0342700.10
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A0R0JPV3|A0A0R0JPV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80494100 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.11
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|K7KU85|K7KU85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80497885 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.2
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|K7KU85|K7KU85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80490973 80523251 +
2 domain predictions
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LotjaGi1g1v0342700.4
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A0R0JPV3|A0A0R0JPV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80514523 +
2 domain predictions
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LotjaGi1g1v0342700.5
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A0R0JPV3|A0A0R0JPV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.6
n.a. Golgi-body localization protein; TAIR: AT1G58250.2 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|A0A0R0JPV3|A0A0R0JPV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.7
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|K7KU85|K7KU85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.8
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|K7KU85|K7KU85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80522567 +
2 domain predictions
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LotjaGi1g1v0342700.9
n.a. Golgi-body localization protein domain isoform 1; TAIR: AT1G58250.1 HYPERSENSITIVE TO PI STARVATION 4; Swiss-Prot: sp|Q6IMT1|SAB_ARATH Protein SABRE; TrEMBL-Plants: tr|I1JV89|I1JV89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342700 LjG1.1_chr1 80491305 80522567 +
2 domain predictions
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