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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025778
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.643s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1890940.1
n.a. PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| chr2 28108109 28115555 -
2 domain predictions
1 GO term
Lj2g3v1890940.2
n.a. PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| chr2 28108109 28116261 -
2 domain predictions
1 GO term
Lj5g3v1598420.1
n.a. PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| chr5 22988168 22997688 +
2 domain predictions
1 GO term
Lj5g3v1598420.2
n.a. PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| chr5 22988168 22999368 +
2 domain predictions
1 GO term
Lj5g3v1598420.3
n.a. PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| chr5 22988168 22997688 +
2 domain predictions
1 GO term
Lj5g3v1598420.4
n.a. PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| chr5 22988168 22997688 +
2 domain predictions
1 GO term
LotjaGi2g1v0010500.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3; TrEMBL-Plants: tr|B9RNE0|B9RNE0_RICCO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi2g1v0010500 LjG1.1_chr2 3833862 3839413 -
2 domain predictions
1 GO term
LotjaGi2g1v0403200.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT2G23380.1 SET domain-containing protein; Swiss-Prot: sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF; TrEMBL-Plants: tr|I1LHC7|I1LHC7_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi2g1v0403200 LjG1.1_chr2 90047659 90056267 -
3 domain predictions
1 GO term
LotjaGi5g1v0244300.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266538 55281091 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.2
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266538 55281091 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.3
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266731 55277849 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.4
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266763 55277771 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.5
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266763 55277771 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.6
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266805 55277065 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.7
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266861 55277065 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.8
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55266861 55277065 +
3 domain predictions
1 GO term
LotjaGi5g1v0244300.9
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 LjG1.1_chr5 55269247 55277064 +
2 domain predictions
1 GO term