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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0010500 |
| Transcript ID | LotjaGi2g1v0010500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3; TrEMBL-Plants: tr|B9RNE0|B9RNE0_RICCO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi2g1v0010500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:3833862..3839413) extracted from Lotus japonicus Gifu genome v1.2.
GATTTGGGCTCTTTTAATCTTCATCCTAACAGTACTGGCCCAACATAAAACGTTGTAGCCTTGTCTTTGCTCGGGTGCTG GGGTGGAAGAAAAGGTTTCTCTCAAAGTGATGCAGCTGTCATTGACCAAAAAAAAAAAAAAAAAAAGTGATGCAGCTGTG AATGTGGAAAGGGGGTGTTTCATGCAGATTGTTTCACAGAGAGCTAGGAAAATATCTAAGTATAATTTTGGGCTTCATGG CTTTGGTGCCAAGTTCATATGATATCATCTGGTTATGCTGATTGTGCTGATTTTTCTTCTGGTTTATTGCTGTTTCATTT TTGTTTTTGCTGTTTTGTTCTTTTTCTCTCTTGCTGTTTTCGTTTAGTGCTCTTTGTATTTTGTAGGTCTTCCTTGCATC ATCTGTTGCTATGCCTTTCCTTGTTTGGTTTGGCTTTTTGTTCTTGTCTACTCACCCATGAGAGAGTTGTTCTTATGCTT CCTTCTTCTGGGTTTAATAAATATACTTCTCTTTTAAAAAATAAATATTAGACATGAACATAAAGTGTACTTTAAAAGGC ATCTATAAATACATGCTTCCGAAAATAAGACTCGATCTTTATGTACCACACTCTTAGTGCCTACTACAAGCCATATAACT CTGTTTATTCTATAGACTTTATCATATTTTTCTTGAATCTCATATCTCACAAGGTCTTTAACATGTACTTCTTCCTGCAA AGTTCTATTCAAAAATGCATATTTAACATTCATTTGTGATGGAATAGGAATATTCTTCCCGTAATTAAGCATGATTTATT GTAATTGTATTTATACCTAGGTTGATTTTACCTGTATATATACTCTGGTTACTGATCAATGAAAGCACGAAATTATTTCA TAATCTTACATGGTATCAAGAGCATTGCATACTGTGCAAGCCGTTACTGGTATGAAATTGGATCCACACTTCTTTCTGCT GGTATATCTCCATAGTTCTGGCTTGGGCATTTTGAGTAGTTTGCAAAGTCAAGGACTGTCACTAGGGTTGCTTCCTTGTA ATGCAAAATCTGTATTCTCTTAATTGATTTTTGGTTTGTACTGTTAGTGGATGGAAAGCTCCTACATGAGCTCTGTTTCT CCTCTGCTTTCTTTTTAGTTGTTGGCATGGCATATTTGCTAACTTCTCTCAATTGTTAATGGTTGGAGTACCCATAGTAC TCCCCTTAATATCATTTTTGCTTACCTAAAACAAATCAAGAGCTTTGCATCCTCTGACCTAAGTTCTTTAATCTTTTTCC TTTTTTTCTTAATTCCCCTCTTATCCCTAGGCCACCGCTGCCTTCACCATTGCAGCCGCGCAAAAGGGATCGGTTGCACT TTTGAGCTAATGTCCATGAATGTTTCAGCTATGTTGTGTTCTTGGACTCTTGATAGTCTTAGGAGTTGTTCTTGTCTTTA TGAAATTTTATCAATTGTAGAAGAAAGAAAATATAATTCCGAATTTTTGGCTTTTGGCAATTGAAATTCAATTTTGCAAA ATTTCTTTGAACATATACGACCAATCTTTATGTAATGCTCTGTCTAATATTTTAGATACCACCCGATTAGTTTTTATTTT TTAATATGAGTTATGTTGTTAGGACCAAAAGAAGCCACAAAGGTCACGGTTGCTGTGGAAAAAGAAGAAAACTAAGAAGT TTAGGCATGCTTCAAAGTCTGGCCTCCCATCTACGTGGACAAGAATTAACAAGGGGAAACACCATATTTTTAAGCAGTAT ACGCCTTGTGAGTGCCAGGGAATGTGTGGAAAGCAATGCCCTTGTATTCAGGCTGGAACTTGCTGTGAAAAGTATTGTGG GTATGTTAATTTTCATATATGTATCATTTGTAGTAAAGGAACGTACCTATAGTTGCCTAATGTTTCATATTTCTCATTTG TATTGCCATTTTTATTGAAAACAACATCCATGAGATAACTAACCATAGGAGTATTCATGTTTAATTACCTTGGGTGATCA GGATAGATTTTCAAATATAGTCATACGCCTTTGAACTCAAACACTAGAGAAACAATGGTTTTCCTTCAAGTGCTACATAT ATACATCTATCACTTGCAATAAAAAGATATTTTTCAAGAAGAAGAAAATGAATTACATGTTCTCAAAGAATCTAAAATTG CATTTTCAACTTAACTAGTGAACTTAAGTAATTATTCTTTAAATGTAATAAATTATCTTTTCTACCTTCAGATGTTCAAA GCTCTGCAGAAATCGATTCAGAGGATGTCAATGTGCAAAGAGTCAATGTAGAAATCGACATTGTCCATGCTTTGCTGCAA ACCGGGAATGTGACCCAGATGTCTGTCGAAATTGTTGGATTAGGTATTGCCGTTTCATATCGTTATGTGTTTCCTATTCC TATTATAACTATTTTAGTTATAACTGAGTGGAACTGACCTCTATCTGTACAATTCCTTTAAATTAAACAGTTGTGGCGAT GGTTCATTAGGGGAGCCACCTCGACGTGAAGATGGTCAGTGTGGAAATATGTTGCTTCTTTTAAGGCAACGTCAAAGGGT TAGTAATTGTTTTAGTCTTTTAATTATAAGTATTTGATTCATGCATAAAGAAATATCTTGCATTATTTTCCTAATATGTG TACTTGTCAGATTCTATTGGGAAAATCTGATATTGCAGGATGGGGAGCCTTTTTAAAGGTTTGATGTCTCTAGTTTCTTT GTTTCAAATAATTTGAGCTTCTTCTCGTCACTAATTGATGACTTATTTCAGCACCCCGTGAACAAAAATGATTTCCTAGG AGAGTACACAGGTGAATTGGTGTCTGATACAGAAGCAGATGAGCGTGGGAAAGTATATTATAAAATAAACACCTCTTACA TTTTCAACTTGAATGACCAGGCAAGTGTCTCCTATAAACTTTTTTTTCTTTTAACTTATGTTTGTTTTATCATCTCCTAT AGATTTTGGTCATGTTTTGAAGAGCTCATTTGATTTTATCTTTCTAGTATAAGCACTTCTTAGTGTTTAAGTAGCTTATA AAAATAATTTATAACTTACCTTTAAGTTGTTTTGAGCTTATTAATTTTTTTTTTTATAAGCCATAAGAAATTAATTGAAT ATGAAGTACAAGGGGTATTTCAACCAAATACAAGAAGGAGGGAATGAAAAGAAAAACTAAAAGACAAAGAATACATGATT GAAGTCCAATGAAACCTCCTACTAGTGAAAGAAACTCACCACCCACCACCTCCTTGAGGGCAGATTAAAAAAATCGTGCC TCGTTAAAACCTTACCAGGGAAAACCCCCTTGGAAAAACCTGGTGAAGAAAAAAAAGTACATGATTTCAGTAAACAAGAG GTAGTCCACAAGGAGGACTTTACAAAAGTAGACATAGAGAAAACATATAGCACAAAGTAGCAGCAATCCACAGTTCTGTC CCATGATATTTAGGCCGTGCAGCAACCAGCAGAGCTAACAATAATTAATCATTGTAAGTAGACTTCGACAATCCACTAAG CTGACCTCCAATTGCCCTTCATGATAGACTAAATTAGGAGCAACGAGCCACCCTTGACCAACACAAGAAAAACAGCGTCC TGCATACTATTTCCAATTCAAAGAGCAAAATGCTGATAGAAAATTCAAAATAGGAGATAAGATAGAACAAAATAACAGAA CCAAAATCTCAAATCAGAAAGGATTCTCCACGCAGAAAACACTCCATAAAGCCACACGGAGCCATAACTCCCATTAAATC AGCCAAGTTGACGAACGCAGCACCAAGGATTGGCCACCCACTCATAGTGAGAAACATGGAAATTTCATTCTCTTTCCTTC AACCAGATCCATGACTTAAATTGCACAAACTCAACAATCCTATCCCCTTCAAAAACAGCATTCTGGAAGATAATAGACTT ACGGAAAAACCAGATAGCATTAATTATCGCCACCCATATGGCCATATCATAGTCACCGCTCTCTTAGCTTTAGGACCACC TGCAAAAAGCTCCCTGAATTGTGGAAAGTGAGGGATAGCCTCCATGTGAAGCACTGAACAAACCCCAAGCCAGTTTAGGA TTTTCGACCAAATCTTCCAGCTATCAATGCAAACAAAAAACAGGTGACAGCAGGATTCCAAAGCACTGGAACAGAAAACA CAGTTCAAGTTTGAGTTTGGAGGAATTGCGCTTCTTCTAGCCAAAGCATACTTTGTTTGAACTCTGTTTAGGAGCACCCT CCAAGCCAAAGCTATCGAATTTGAGGGTATTAACATAAAAATAAGTGCTTATATAAGTTTTTTAGTATGTCCAATTAACA TAAGGATAAGACTTATGTCATAAGAGATAACTATTATAAGAACTTAATTAAGTTGGTTACCTAAAGATGCCATTGATTTT TCTTGTCATTTATACTTGGTTTTCATATGATGTAAGATTTCTAATCATGTACCTATAAGCTACTATTGTGCTAATTTTTA ATTGATTTTTGTTAGTTTTCATCAACCTACCCCACCCCCAATATCTTATATGCACAAGGTACAATATATTTGGATTTCAA AATTTTGAAGTATTATATTAAACCTAGTTTCTGATTGTTTTAGTACGCTCTCGATGCTTACCGCAAAGGAAACAAGTTGA AATTCGCAAACCACTCTTCAAAACCCAATTGTTATGCTAAGGTAAGTACTTGAACTTCGACTTTAGGGAGATATGAAAAC TTACTCCTCCTCTTAGTGAATTTTTCCCATCTTTAGTAGTATATATTCCCTTATTTAATCATGAATCTTGGATTATATAA TGTATCCATCCGACCTAAATATATATTCCCTTGTCCATCCTATGTTCTCAAAATTTATAGTTAGCTTTTTACTTTTAAAA TTTTATAAATGATACGAAAATTAAACATTAGAACTAGTTATTTTGAGAGGGAGAACTAGTTGTTCAACCTTACAAGAGGA CCTTTAAATTTCTAAGTCGCTATACCCATAACTCAATTGTGTAGATTTTATAATTGGCTTTTTATATTTGTTTTATAGGT GCTTCTTGTTGCCGGGGATTATCGTGTAGGCATATTTGCAAAGGAACGTATTGAAGCTGGTGAAGAGATTTTCTATGATT ATCACTACGAACCAGATCTTTCACCAGCTTGGGCTCTTAAAGACAAGGGTTCAAGTTCAAGTAGAGGCGAATCAAAAGTT TCTCGAGGAAGGGCAAAGAAACACCCTTCTTATTGAAGAACCACATAGCCAAGGTTCAGGGTTTGGGATTTACATTATCT TTAGTGAAACTAAATTTATGACATTCTATCATAAATACCCTGGAAGAACCTTCATGAGGATAAAAGTAACATATACTATT CTGCATAAAGTTGTAGAAATAATAAAAAAATAAAAAGGAAATAGGTTAAGCATTTCCTTATTGAGGACAAAATTTCCTTG AATTTGTTAACTAGAGTACAGAAGTTTGTTGAACATGTTCGTGGCATGTTTATTATTTTTGTTTATACTTCTTCCAGTAT TTTGCAATTTTTGTGATTGTCACAAATATTTA
CDS sequence (LotjaGi2g1v0010500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGGAAAGCAATGCCCTTGTATTCAGGCTGGAACTTGCTGTGAAAAGTATTGTGGATGTTCAAAGCTCTGCAGAAA TCGATTCAGAGGATGTCAATGTGCAAAGAGTCAATGTAGAAATCGACATTGTCCATGCTTTGCTGCAAACCGGGAATGTG ACCCAGATGTCTGTCGAAATTGTTGGATTAGTTGTGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGAAGATGGTCAG TGTGGAAATATGTTGCTTCTTTTAAGGCAACGTCAAAGGATTCTATTGGGAAAATCTGATATTGCAGGATGGGGAGCCTT TTTAAAGCACCCCGTGAACAAAAATGATTTCCTAGGAGAGTACACAGGTGAATTGGTGTCTGATACAGAAGCAGATGAGC GTGGGAAAGTATATTATAAAATAAACACCTCTTACATTTTCAACTTGAATGACCAGTACGCTCTCGATGCTTACCGCAAA GGAAACAAGTTGAAATTCGCAAACCACTCTTCAAAACCCAATTGTTATGCTAAGGTGCTTCTTGTTGCCGGGGATTATCG TGTAGGCATATTTGCAAAGGAACGTATTGAAGCTGGTGAAGAGATTTTCTATGATTATCACTACGAACCAGATCTTTCAC CAGCTTGGGCTCTTAAAGACAAGGGTTCAAGTTCAAGTAGAGGCGAATCAAAAGTTTCTCGAGGAAGGGCAAAGAAACAC CCTTCTTATTGA
Protein sequence (LotjaGi2g1v0010500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCGKQCPCIQAGTCCEKYCGCSKLCRNRFRGCQCAKSQCRNRHCPCFAANRECDPDVCRNCWISCGDGSLGEPPRREDGQ CGNMLLLLRQRQRILLGKSDIAGWGAFLKHPVNKNDFLGEYTGELVSDTEADERGKVYYKINTSYIFNLNDQYALDAYRK GNKLKFANHSSKPNCYAKVLLVAGDYRVGIFAKERIEAGEEIFYDYHYEPDLSPAWALKDKGSSSSRGESKVSRGRAKKH PSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 209 | 209 | 4.4E-67 | – | |
| ProSiteProfiles | 1 | 78 | 78 | 20.017 | ||
| PANTHER | 2 | 240 | 239 | 1.0E-127 | – | |
| PANTHER | 2 | 240 | 239 | 1.0E-127 | ||
| SUPERFAMILY | 6 | 210 | 205 | 3.68E-52 | – | |
| SMART | 27 | 64 | 38 | 1.1E-9 | ||
| Pfam | 30 | 61 | 32 | 2.8E-4 | ||
| Pfam | 31 | 62 | 32 | 6.7E-11 | ||
| SMART | 92 | 213 | 122 | 1.2E-32 | ||
| ProSiteProfiles | 92 | 207 | 116 | 14.729 | ||
| Pfam | 103 | 206 | 104 | 4.5E-15 | ||
| MobiDBLite | 219 | 243 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | PcG protein complex | A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure. |
Expression pattern of LotjaGi2g1v0010500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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