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Lj5g3v1598420.1

Overview

Field Value
Gene ID Lj5g3v1598420
Transcript ID Lj5g3v1598420.1
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles 1 869 869 271.566
MobiDBLite 1 20 20
Coils 35 55 21
PANTHER 42 69 28 4.70E-146
PANTHER 42 69 28 4.70E-146
PANTHER 255 300 46 4.70E-146
PANTHER 255 300 46 4.70E-146
PANTHER 443 850 408 4.70E-146
PANTHER 443 850 408 4.70E-146
MobiDBLite 458 477 20
SUPERFAMILY 591 839 249 4.71E-53
ProSiteProfiles 607 706 100 21.924
Gene3D 607 842 236 1.80E-57
SMART 655 692 38 2.50E-11
ProSiteProfiles 720 835 116 13.547
SMART 720 841 122 2.00E-33
Pfam 731 834 104 3.40E-10
MobiDBLite 841 869 29

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Cellular component PcG protein complex A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.

Expression data

Expression pattern

Expression pattern of Lj5g3v1598420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1598420.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.