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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0033249 |
| Transcript ID | Lj0g3v0033249.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 12 | 829 | 818 | 2.80E-294 | ||
| TMHMM | 37 | 55 | 19 | – | – | |
| Pfam | 37 | 444 | 408 | 1.60E-25 | – | |
| Phobius | 37 | 55 | 19 | – | – | |
| Phobius | 56 | 232 | 177 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 233 | 254 | 22 | – | – | |
| Phobius | 255 | 274 | 20 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Phobius | 275 | 299 | 25 | – | – | |
| Phobius | 300 | 310 | 11 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 311 | 332 | 22 | – | – | |
| Phobius | 333 | 343 | 11 | – | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 344 | 364 | 21 | – | – | |
| Phobius | 365 | 426 | 62 | – | – | |
| Phobius | 427 | 449 | 23 | – | – | |
| TMHMM | 427 | 449 | 23 | – | – | |
| Phobius | 450 | 829 | 380 | – | – | |
| Gene3D | 518 | 766 | 249 | 1.90E-60 | ||
| CDD | 523 | 757 | 235 | 3.41E-101 | – | |
| ProSiteProfiles | 523 | 769 | 247 | 16.874 | ||
| SUPERFAMILY | 549 | 751 | 203 | 7.10E-48 | ||
| Pfam | 556 | 698 | 143 | 8.90E-21 | ||
| SMART | 562 | 746 | 185 | 3.40E-08 | ||
| ProSitePatterns | 671 | 685 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0033249.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0033249.1, powered by CORGI.
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