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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1617880 |
| Transcript ID | Lj4g3v1617880.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 12 | 908 | 897 | 0 | ||
| PANTHER | 12 | 908 | 897 | 0 | – | |
| Phobius | 35 | 53 | 19 | – | – | |
| TMHMM | 37 | 54 | 18 | – | – | |
| Phobius | 54 | 314 | 261 | – | – | |
| Pfam | 268 | 558 | 291 | 7.30E-14 | – | |
| Phobius | 315 | 333 | 19 | – | – | |
| Phobius | 334 | 352 | 19 | – | – | |
| Phobius | 353 | 376 | 24 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 377 | 395 | 19 | – | – | |
| Phobius | 396 | 424 | 29 | – | – | |
| TMHMM | 397 | 419 | 23 | – | – | |
| Phobius | 425 | 435 | 11 | – | – | |
| TMHMM | 434 | 456 | 23 | – | – | |
| Phobius | 436 | 454 | 19 | – | – | |
| Phobius | 455 | 465 | 11 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 466 | 486 | 21 | – | – | |
| Phobius | 487 | 491 | 5 | – | – | |
| Phobius | 492 | 512 | 21 | – | – | |
| TMHMM | 495 | 512 | 18 | – | – | |
| Phobius | 513 | 543 | 31 | – | – | |
| Phobius | 544 | 562 | 19 | – | – | |
| TMHMM | 544 | 566 | 23 | – | – | |
| Phobius | 563 | 909 | 347 | – | – | |
| SUPERFAMILY | 622 | 828 | 207 | 1.55E-35 | ||
| Gene3D | 628 | 742 | 115 | 5.50E-24 | ||
| ProSiteProfiles | 630 | 824 | 195 | 12.032 | ||
| CDD | 634 | 812 | 179 | 1.71E-71 | – | |
| Pfam | 652 | 765 | 114 | 7.60E-12 | ||
| SMART | 660 | 800 | 141 | 9.00E-06 | ||
| Gene3D | 745 | 831 | 87 | 7.00E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1617880.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1617880.2, powered by CORGI.
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