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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026953
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.388s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0124019.1
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 55669619 55673399 -
2 domain predictions
1 GO term
Lj0g3v0180419.1
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 87762692 87780301 +
2 domain predictions
1 GO term
Lj0g3v0180419.2
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 87762692 87780301 +
2 domain predictions
1 GO term
Lj0g3v0180419.3
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 87762692 87780301 +
2 domain predictions
1 GO term
Lj0g3v0318989.1
n.a. PREDICTED: callose synthase 2-like isoform X3 [Cicer arietinum] gi|502087187|ref|XP_004488455.1| chr0 166562428 166564507 -
2 domain predictions
1 GO term
Lj4g3v2742860.1
n.a. PREDICTED: callose synthase 5-like [Glycine max] gi|356511176|ref|XP_003524305.1| chr4 36845458 36848177 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.1
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108615963 108642084 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.2
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|I1KZH4|I1KZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616035 108642257 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.3
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616289 108641390 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.4
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|G7KWP5|G7KWP5_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616289 108641390 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.5
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616304 108641390 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.6
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A0B2QTX7|A0A0B2QTX7_GLYSO Callose synthase 3; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108616304 108641390 +
2 domain predictions
1 GO term
LotjaGi1g1v0554200.7
n.a. Callose synthase-like protein; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|I1KZH4|I1KZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0554200 LjG1.1_chr1 108639868 108641390 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.1
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A151RX23|A0A151RX23_CAJCA Callose synthase 3; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67602820 67616745 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.2
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A151RX23|A0A151RX23_CAJCA Callose synthase 3; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67602880 67616180 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.3
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A151RX23|A0A151RX23_CAJCA Callose synthase 3; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67602884 67616180 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.4
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A151RX23|A0A151RX23_CAJCA Callose synthase 3; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67602884 67616180 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.5
n.a. Callose synthase; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|A0A151RX23|A0A151RX23_CAJCA Callose synthase 3; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67602892 67616180 +
2 domain predictions
1 GO term
LotjaGi5g1v0362200.6
n.a. Callose synthase-like protein; TAIR: AT5G13000.1 glucan synthase-like 12; Swiss-Prot: sp|Q9LXT9|CALS3_ARATH Callose synthase 3; TrEMBL-Plants: tr|K7LM61|K7LM61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0362200 LjG1.1_chr5 67615358 67616180 +
2 domain predictions
1 GO term