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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027105
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.552s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3765010.1
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X2 [Cicer arietinum] gi|502100538|ref|XP_004491744.1| chr1 43147820 43149713 -
2 domain predictions
3 GO terms
Lj1g3v3765010.2
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1 [Cicer arietinum] gi|502100534|ref|XP_004491743.1| chr1 43148798 43149654 -
2 domain predictions
3 GO terms
Lj3g3v3374690.1
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine max] gi|356571467|ref|XP_003553898.1| chr3 41484478 41485768 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.1
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116573724 116583882 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.2
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|I1MLN7|I1MLN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116582133 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.3
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116583635 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.4
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116583780 -
2 domain predictions
3 GO terms