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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0618800 |
| Transcript ID | LotjaGi1g1v0618800.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116573724..116583882) extracted from Lotus japonicus Gifu genome v1.2.
CCTTCATCTTCATTACCCATACCTTTATTATGCCTACCATTTTGTTCTATACACTCAGATCCTAACTTCACTTCTCGAAT TCGCTACGAAATTCACAGCTACATCGCTTCCAACCTCTCCATAGACATGGTTGGTACCTTCTCTTTCTACCCTTTGTTCG ATTTTACCTTGTTCCATGTTTTCGTCGCCGTTTTTGTGTTTCTAACTTTGAACACAGCATCCTTAAATTTTCCAATTTTT GTTGTTGTTGTTGTGTTTGATTCTAGGCTACACTTGCCGATTCTTTTCTCGCCGACCTCGATGAACTCTCTGATAACGAA GCTGAAATTCCCGTGAGTGTAATCGTTTTTTGAAACTTGTGAATTTTGAAGGAAAATGTTTTTTGAGATGAAATTGATGA TGAATAACCCTTATTGCAGGAGGATAATGACGCTGATGCTGCAGATATGGAAGAAGATATTGATGGAGACTTGGCTGATC TAGAAAACCTCAACTATGATGACTTGGACAGTGTTTCCAAGCTGCAGAAAACCCAGAGATACGTTGATATTATGCAGGTT AGTTAGTAATCCTTCACTTTCAAGTGGGTTTAAGTTGTGCTTGCCGTTGTGATTGATGCAACTAACAAACAATTGTGAAC ACCTTGAAACCGAAGCAGCGATTGCGGTTGTGGTTGGCTGGTTGCTATTGCATTCTTTCTTAATTATGACAGAATCTAGA ATTAATTCAACTAAGCTGTGCATTGGTTGAAAATGAAGCTTTTAACATCCTATGTTTATTTTTATGTTTTCTAATATCTG GGGTGCTTCTAATTTATTTAGGTTTGTATTGACGTGGTGTGACAATTAATGTTATTCTTTATGGCAGAAAGTGGAAGAAG CCCTTAAAAGGAGTTCAGATGCATCCAATCAGGGGGTAGATTTAGAAGATGATCCTGAATACCAATTGATTGTGGAATGC AATGCACTGTCAGTTGACATTGAGAATGAAATTGTTATTATTCACAATTTTATTCGTGACAAGTATCGCTTGAAATTTCC AGAGCTTGAGTCACTGGTGCATCACCCAATTGATTATGCACGTGTTGTTAAAAAGATAGGAAATGAAGTGGATCTGACTC TTGTTGATCTAGAAGGGCTTTTACCCTCAGCCATTATCATGGTTGTCTCAGTTACAGCGTCAACTACGACTGGCAAACCA CTTCCCGAAGAAGTCCTTAGTAAGACAATTGAGGCTTGTGATCGAGCTCTTGCTCTTGATTCAGCGAAGAAGAAAGTTCT TGATTTTGTTGAGAGTAGAATGGGGTACATTGCACCTAATCTTTCTTCCATAGTTGGGAGTGCTGTTGCAGCTAAACTCA TGGGGACGGCTGGTGGTTTAACATCTCTTGCAAAGATGCCTGCTTGTAATGTTCAGCTTCTTGGTGCCAAGAAAAAGAAT CTTGCTGGCTTCTCCACCGCAACATCTCAATTTCGTGTAGGTTACCTAGAGCAAACGGAAATATTTCAGACCACTCCTCC TGCTTTAAGGATGCGGGCATGCCGACTCCTGGCTGCAAAGTCTACACTTGCAGCACGGGTAGATTCAATTCGTGGGGATC CATCTGGGAGAACTGGGAGGTCTTTCAAGGATGAGATCCACAAAAAAATTGAAAAGTGGCAAGAGCCCCCTCCTGCCAAG CAACCCAAACCCCTTCCAGTTCCTGATTCAGAGCCTAAAAAGAAGAGAGGTGGTCGGCGTCTTAGGAAGATGAAGGAAAG GTTAGTATAGTTTTAACTTGTTTGCTGTACTTGTTTTTCAGGCTGTAGGGTTGAGACTTGAGAGTATATTTTCTTTATAC CTTTTTCGAATTTCATGACCTGTTGATTCTTATGTCAGGTATGCAGTAACAGACATGAGGAAGTTAGCCAACAGGATGCA ATTTGGAATCCCTGAAGAGAGTTCTTTAGGTACAATTTACTATATTTCACTTGTACTGATCTGATTTATATTTGCAATGT GACGTTTTGCTTTTTTATTTGTAATTTGATGCATGCATTTATATTTTACTATAATTTAAATTATAAAGAACTGAGGATCG GATGGTATAAAAGAGGGAATCCAGTAATAAGCATTGAATAATTATGATGTGATACAAAATCCTTGTTAGGTGCCACTATG CTCGACCAGGTGAGAAATATGAATAATTAGTAAGCAAATATGGGAGGGAGTTGAAGTTGGGGAATGGAATAGGGTTTTCT GTTAGGCTGTTCATAGGGGTGGCAAAGAGAAAAGCAAGTACTGAGTAAGGGAATTGAGGGGAAAGACCAGGTTCTTGGAC TGCCTGGATTATGACCATTTATTTTTCTTTGATTCAGTGTGTCTTCTTTTTCATTACACATTAAAAACTCCACCTTTGAT ATTACTCTGATATTTAATCAGAAGATAACTAGATGTTTGTATTCTGTTGTTCTTGAGCTGGAATGGCTAATGTTTCAATC AGGCAGAAGATAAATGTAGCCAACTGAAATTGGGTCTGTAATCACAAGACAAATAGTGGAAAATTTGCATAAATTCGATA AATGGCCTGAAACATGTTGAAACAGCAATTCTTTGGGATCGGAAATACAATTGTAGTAAATGGGTATAACCTGTTAGGAT CCAAGCTAACAATATATGCAGAAAAGGTAATGCGCTGAAATAGAAACAACTATGATTGCTTATTGATGTCAATAGAAAGT TACAGAGAAGGAAAAGATCCTAGATTCTGCCCAGAGCTAGGCTCCTATTGGAAGCTAATGCTCCCTACTCAACATGACAG CTATGAATAATCCAAGATACCCCTCTACCTCTCATTCACTCCCCTTAAATTCTGTGGTCAGTACAATCAACCCCTCTCTC TATTCTGTTAGGCAGTTACATAGTATTCCCATTTCCCTTTCTTAGCCCTTCTAGAATATACCCTCCATACCTTTGGGCCC GCTCCCTTGTAATGGAGCAATTGCTCCTGTGCACTTGACACCTGGTCAGTGTGCCTAACAATACCCCCTCCTAGAACAGC TACCTTGTCCTCAAGGTTAAAATCAGGAAATTGGCTCTTAATGGTTACAACATCCTCCCAAGTGGCTTCCTCCACCGATT TGCCTTGCCACTGAACTAGTAATTGAGGTACGTCTGTACCCTGTTCCACGATCACACGAGTGGCCAACACATCATGAGGT TGCACAACTTCAGCATGTTCCCCTTCGAGGTTGTCAGGTAACTCAGCATGCTCGTCATAGTCCCCAACTGCTTTCTTGAG CAAGGACACATGAAATACAGGGTGAACGCGCGAATTTGCAGGTAATTTCAAGCGATAAGCAACTGCACCCACCCTAGCCA AGATGGGATATGGCCCGTAGTATCGAGCTGCCAGTTTTGCGTGTACCCGGGTCACGACGGAATGTTGGCGATGAGCCCTC AATTTGACAAAGACCCATTCACCAATTGCAAACGATTTCTCCACTCTCTTAGCATTCGCCTGATTCCTCATTCTTTCCTG CGCACAAGATAATTGGTTCCTCAGTTGCCTAAGTGCTTCATCCCTGTCCAGCAATTCTCTTTGGACAGCTTCTACACGAG TTTCACCAAGGCCCCAACGAGTGATTGCTGGGGGCTTCCGACCATAAACCACCTCAAAAGGGGTCTGATTAGTTGCGGAA TGAAAAGTTGTGTTAAACCAAAACTCAGCCCAATGCAACCAGTTTGCCCAAGTCTTAGGTTGATCGGCGGAGAAGCAACG AAGGTAAGTTTCAAGACATCGATTTACCACCTCCGTTTGGCCATCGGTCTCAGGGTGGTAGGCAGAGCTCATCTTGAGTT GGGTCCCTTGCAAGCGAAAAATCTCCTTCCAGAAGTGGCTCATAAAAATTGGGTCACGGTCACTTACAATGGTTGATGGA CTGCCGTGCAAGCGTATGATCTCTTTGGTAAAAAGCTCTGCAATGCTTCGAGCTGTGTAAGGATGCTTCAGCGGCATAAA ATGGCAATACTTGGATAAACGATCCACCACCACCAAGATTGCTTCGAAGCCCTTGGACTTGGGTAGGCCGGTTATGAAAT CGAGTGATATATCTTCCCAAACTCTTTCTGGAATTGGCAATGGTTGTAGAAGGCCAGCTGGGGAAGAAGCTAAGTATTTA TGGCGTTGGCAAGTATCGCAACGACGTACATAGTCCTGTATCGCTCCCTTCATCCCGATCCAATACAGGTTCTCAGCCAC ACGACGGTATGTTCGCAGAAACCCAGAATGCCCCCCTTGAGGGGTAGTGTGGTATTCCTGCAACATGCGAGGAATCAAAG AAGAGGTCTGAGATAGTACCAACCGCGACTTGTAGAAGAGGATCCCTTGTCGGATGCTGAAGTCAGGATGTGAAGAAGGG TCCTTGAGTAAAGCCTCGATGATCGACTGAAGCTTGGAGTCACCACGAATTTCCTCTGCTACTAGGAATTTCTCGTCCCA AACTGGATAAGAAACCAGAGTACTCAGTTCTCCTCCGTCGATGATGCGCGACAGGGCATCCGCGCCCTTGTTCAACCTTC CTGGTTTGTAAACAATATCAAAGTTGTATCCCAGAAGCTTGGCAGACCAATTTTGTTGTCCTCCCGTGACAATTTTTTGA TGTAACAGCTCTTTGAGGCTTTTTTGATCTATGGAGACCAAAAACTTCCGGCCCAATAGGTAAGGCCGCCAGTGTTGAAT GGCAAGAGCTACTGCCATCAGTTCTTTTTCGTACGCTGATTTTGCCAGATTTCTTACCCCGAGAGCTTTGCTATAGTAGG CTATCGGGTTCTTTCCTTGCATGAGAATAGCCCCTATTCCACTGCCTGAGGCGTCGCATTCCACTACAAATTCTTTGTCA AAATTTGGAAGAGCCAAAACAGGGGCTGTAGTCAGCTTCTCCTTGAGTGTGTCAAACGCTCGTTGTGCCTCAATTCCCCA ATGGAAAGCATCTTTTTTGGTTAATTCCGTCAAAGGCCTCGCTAATTTCCCATAGTCTCGAATAAATTTTCTGTAGTACC CCGTTAGGCCCAAGAATCCCCTCACCCCCTTCGCATTGGTGGGAGTTGGCCACTGCATCACACTAATTATCTTGTTGGGA TCGACGGCCACTCCCTGTTTTGAGATCAAGTGACCTAAGTACTCGACCGTCTGCTTAGCAAAACTGCACTTCTTTTTGTT TGCTGTCAACCCTTGTTTATGGAGCACGCACAATACCATTTCTAAATGAGCAAGATGAGAATCCCAATCTGAGCTGTATA CTAATATATCATCAAAGAAAACGAGGACTCCTATTCGCAGCAAAGGCCGGAAAATCTCATTCATCAAGCTCTGAAATGTA GACGGAGCATTCATGAGACCAAAGGGCATGACCATGAATTCATAATGTCCTTCGTGAGTACGAAAGGCAGTTTTGTGAAC ATCTTCAGCCCTCACTCGCACCTGATGATATCCTGATTTCAGGTCCAATTTTGAAAAGAATTGGGCACCATGCAGTTCAT CAAGAAGTTCCTCGATCACCGGTATGGGAAACTTGTCTGGGATCGTTACTTTGTTGAGTGCTCGATAGTCAACGCACATC CTCCATGATTGATCCTTCTTCTTTACCAGAATAACCGGACTTGAATATGCACTGGTGCTTTGACGGATTATCCCATCGGA TAACATTTCCTTGACCTGTTTTTCAATCTCATTTTTGTGGTGATGTGGATAACGATACGGCCTCACATTAACCGGGCCTT GCCCTTCTTTGATGTTGATACAGTGTTCCCTGCCTCGGCTTGGTGGCAAACCCACCTTTGCTTTGAAAACTCCTTCGTAT TTCTCAAGTAGCTTCGCTAAACCCGCTTGCTGGTCTGTGGTGAGGCTTTCTTCCTCGCGTTTCCCTTGTTTCACCGGTTC TAAGAGACAGAGGACCCCAGTTTCCCCTCCCTTTTCCCGACGGAGAATCTGCTGCAGTGCCACCATGGATTCCCTGCCCG CACTTAAACCCTGTAGCTTGACCCATCGATCACCCTTCCAGAAACTTGAGATTGCCAATTAGCGATCGTATCCCCCAATG TCTTCAACCATTCGATCCCCAAAACCATGTCAGGCCCCCCTAGCTCGAACAGATGTGGATTGCATTCGAGGGAATAATCC CCCATTACAAGTTCAATGCTCCTACAGCGGCCTCGGGCGTGGGTTTGAAACCCATCTCCTAGCTTGATGGTCATTCTTGG TGTGTCTTCTACCTCCCAATTCATGCGTTGCACGAGCTTGAGGTCAATGAAATTGTGGGTTGCCCCACTGTCAACCAACA CCAACATAGGAACTCCACGAATTGTACCCTGTAGCTTCATCGTTTGGGGCTGTTCCTGAAGAGTATTTGCCATGTTGTAA AAACTCATCATACTCATTTCACCTTGGTCTCCTTCTTCCTGCTCCTCTACTTCCATGGCTAGCACATTCCCGTCCTCAGT TTCTTCATCCCCCTCTTCTACTATGAGAACTCTCAATTGCTTATCTGGACATTGATGTAAGGGGTGGTATGGTCCTCCAC ATTTGAAGCACTGACCCTTCTGCCTACGTTCCAGTAATTGTGGATAGGTCAAGTGAGAAAACCCTCTATCTCGCGGCCCA ACTCGTCTTTCTGTTTGATTTTTTGTTTCAACCTTTGGGCCATTAAAAACTGCCTTGGTGGTAGGCCCGGAGTCTTTAGT GTCTTTGACCCATACCCAATCTGCACCACCCGTTCGTCCTGATCCACCCGACCCGGTCTTGAACCCTGAATTTCCAAACC GATTACTCCTTGAGTAACCCGATCCGGTATCCCCCTTCACCTCCTTCTCTACTGCCCTAGTCACCGCCAGCAATTTTGAT CGGCTAACTCCTCCCATCGCCGCCAGACTACGGACCTTCCCACGGAGCTCCTCCTTCAAACCATGGAGGAAATAGCCCTG AAATTGCTTATCGGGCAATTTAGGGATTTGAGCGGTGAGGTACTCAAATTCGATGATGTATTCTTCCACCGTCCCTTTCT GTCGCAGCTCGGTGAGTTGCTCATACACGTCACCAATACCGTGTCCTCCGTATCGCTCCAGTAATGCTTCACGCAACCGC TCCCATGTCAGCGATTCCTCCGCTTCAAGAAGAGCATTGTAGAAATGGATTGTGGGTCCATCCATGCTCAGTTGTGCTAA ACTCACCTTGACCTCCGGTGATGTTTCCTGAACCTTGAAGTATATCTCAGCTCGAGATATCCAGCCCGCGGGGTCCTTGC CATAAAAAACCGGAAGCTCTACTTTCTTTACCGATTGACGGAACTCCGTCAGCGCCTCACCGTGCAGCTGGTGAGCTCGC CGCTCCCCTCCTGAGATCTGGTTCAGATTTATCACCTGCTCCACAGATCCCGTTCGCACGCCAGAACTACCTCCAATGTC GCGATTGACACTCGTCTCCTCAACGTGGACTGATTTCCCCAGTGATCGTTCCATCAAAGCTACCAACGACGTTGGTAGAT CCTTGACTGCGGTGGTGACCGCTGCTAGAGATGATCGCACCTCTGCAAGCTCCGACTCCAGCGCATCGATTTTCGCTTCC ATGAGGTTCGTCGATTGTTTGGATTTTCTGGGTGGCATCCACTGGCTCCGTTTCCGGATCCGGCAGGTCGGACCAAATTG TTAGGATCCAAGCTAACAATATATGCAGAAAAGGTAATGCGCTGAAATAGAAACAACTATGATTGCTTATTGATGTCAAT AGAAAGTTACAGAGAAGGAAAAGATCCTAGATTCTGCCCAGAGCTAGGCTCCTATAGGAAGCTAATGCTCCCTACTCAAC ATGACAGCTATGAATAATCCAAGATACCCCTCTACCTCTCATTCACTCCCCTTATATTCTGTGGTCAGTACAATCAACCC CTCTCTCTATTCTGTTAGGCAGTTACATAGTATTCCCTTTCTTAGCCCTTCTAGAATATACCCTCCATACCTTTGGGCCC GCTCCCTTGTAATGGAGCAATTGCTCCTGTGCACTTGACACCTGGTCAGTGTGCCTAACATAACCTCTACAACCTTGAGG CAGAATATTCTGCTAAAAACTGTTACCTGATTCCCCGTCAATAATCCAGGTCAAAGTATTAGTGTACCTGTACCAGCCCA CCCAAATTTCCATTCAAACGTAATAAGAGTCATAAAGTCTTTAGTAGTCCTAACTCAGTGATAAAGACAGTATGAAATCC TTACGAACATGACTTCAGCTTTTTTTAATTATTCTTTTAATATTGTTAATTTGTAAAAATTTCAACATCTCCTTACTCTT TTATTTATGCTTTGGTTATAGGTGATGGTCTGGGTGAGGGTTATGGAATGCTTGGTCAGGCTGGCAGTGGCAAGCTTCGT GTGTCTATGGGTCAAAGTAAACTTGCTGCAAAAGTTGCTAAGAAGTAAGTCCTTGTTGCTTTTAGTTCTACGTATCTTAT TATGTTCTGGTTACTTTATTTTGTTGCAAGATGCTGAATCATATTTCCTGTCAAGCTATACTACTAGCTGATATGAATGA CAATTCTGATGGCTTATTTTCATTTATCAGATTCAAGGAAAAGAGCTATGGCAGCAGTGGTGCTACATCTGGTTTAACCT CAAGTCTTGCATTTACTCCTGTGCAGGTCAGCATCATGAATTACTGTTTCTGGAACTTTTCTCTTGCTTTGTAGCAGTTT AGCTCCATATCTAGTGTATGAACTGTTAGTTTTGTGTAAAAATGGCAATGGTATGTGAGACCTATGATGGAAACCTTGTA AAGTATGAGAAGCTGAAACACATATTTAGGGACAGGAATCAGTGGGTTGCTTCCCTACTGCTATTTTGACAGATTTATAA GGCTGCTATGAGGGGCTCAAGCAGTTATTAAGATGACACTGGTGATTCAGTGAGTGTCCGAATAAATATGGCAACATTAT ACATTGCAGGGGCTACACCTGGGCCTTCAAAATTAGAGACATTGAACCCCATTGGAGTAAAGAATCACCATCTTTTGGGA CAAAGAACAATAAGCTTCCTAGTTCCATATTTATTCGGACACATTGCCCATTTACCCACTTCCACATCTCTATTGTCCTC TCCGAAGCGATTTTGTTGCTGATAGAGGATTATAGGCTGTGATTTCCCTGGTCTTCTCACTTATGCAAACTGCAGTCTTA TAGTCTGTGATTTAGTCAGTGTATCCAATGAATATGATTCTCTACTCAGATGAGGATGGTAAATGGATTACATCGGTTAC CAATCTGTGACATCATCAAGCAAGTTCTCTAAATGTCGTGTCCATTTGTGCCTTGTGAAACCCTGTTATCATTTGCCAAT GCTGGTGTTATCTGTAAAATAGTTGGAAAAACTTCTAGTTCAGCATGGATGACGCTTAAATCACTATACTGATATTCAGC ATGGATGACGCTTAAATCCCAATAACTTAAGTTGATTAGTTTACTTCTATGAAGTTTTGCATTCAAGTTCATGTATATCT TTGTTTATTTTCAGGGGATTGAGCTGTCAAATCCACAGGCCCATGCACATCAACTTGGTACTGGAACTCAAAGTACCTAT TTCTCTGAAACAGGAACATTTTCGAAGATCAGGAGGACTTGAAACCATGCATGAATACAAGTTCTTGTAGTTTATAATAG ATTTTTGAAGCATAGCCATATTATTCCCTTGTATATGACTCTCACAACGAGGTTCCCTTTCGCAAAAAACGATGATACAA TCTAACATTTTCATGGGTTGGGTTTAGAATGAAAAAAGATTATCATTGTAGACCAAGCTTCTTTGCAAGGAGCATGCTGC TTTAACAGCCAAGCCAACCTCCTTGGGTTGGTTGATGGTTAGCACCATTGTCTAATTATGTCAGCTTGCACCCGTGGTAG GAATTCATCAAATTTTCTACTTAAAAAAAAAAGTCTGCTTGTGCAAAGTTTACGGTTTTTGTTAAACAGAATGGTACTAA ATTGGGTAGCAAAGGTTAGATTAATATAAAAAGCAGCTCAAACTCACCTGGTTCAACTGGTTAGATCGGGCAAAGTTGGC CAGTTTTGGGCAAAACGAATGAGTGCTCATTGAAATTTGAGTGGCCAGTTTTTATAATATCATATTTTTAGAATACGCA
CDS sequence (LotjaGi1g1v0618800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACACTTGCCGATTCTTTTCTCGCCGACCTCGATGAACTCTCTGATAACGAAGCTGAAATTCCCGAGGATAATGA CGCTGATGCTGCAGATATGGAAGAAGATATTGATGGAGACTTGGCTGATCTAGAAAACCTCAACTATGATGACTTGGACA GTGTTTCCAAGCTGCAGAAAACCCAGAGATACGTTGATATTATGCAGAAAGTGGAAGAAGCCCTTAAAAGGAGTTCAGAT GCATCCAATCAGGGGGTAGATTTAGAAGATGATCCTGAATACCAATTGATTGTGGAATGCAATGCACTGTCAGTTGACAT TGAGAATGAAATTGTTATTATTCACAATTTTATTCGTGACAAGTATCGCTTGAAATTTCCAGAGCTTGAGTCACTGGTGC ATCACCCAATTGATTATGCACGTGTTGTTAAAAAGATAGGAAATGAAGTGGATCTGACTCTTGTTGATCTAGAAGGGCTT TTACCCTCAGCCATTATCATGGTTGTCTCAGTTACAGCGTCAACTACGACTGGCAAACCACTTCCCGAAGAAGTCCTTAG TAAGACAATTGAGGCTTGTGATCGAGCTCTTGCTCTTGATTCAGCGAAGAAGAAAGTTCTTGATTTTGTTGAGAGTAGAA TGGGGTACATTGCACCTAATCTTTCTTCCATAGTTGGGAGTGCTGTTGCAGCTAAACTCATGGGGACGGCTGGTGGTTTA ACATCTCTTGCAAAGATGCCTGCTTGTAATGTTCAGCTTCTTGGTGCCAAGAAAAAGAATCTTGCTGGCTTCTCCACCGC AACATCTCAATTTCGTGTAGGTTACCTAGAGCAAACGGAAATATTTCAGACCACTCCTCCTGCTTTAAGGATGCGGGCAT GCCGACTCCTGGCTGCAAAGTCTACACTTGCAGCACGGGTAGATTCAATTCGTGGGGATCCATCTGGGAGAACTGGGAGG TCTTTCAAGGATGAGATCCACAAAAAAATTGAAAAGTGGCAAGAGCCCCCTCCTGCCAAGCAACCCAAACCCCTTCCAGT TCCTGATTCAGAGCCTAAAAAGAAGAGAGGTGGTCGGCGTCTTAGGAAGATGAAGGAAAGGTATGCAGTAACAGACATGA GGAAGTTAGCCAACAGGATGCAATTTGGAATCCCTGAAGAGAGTTCTTTAGGTGATGGTCTGGGTGAGGGTTATGGAATG CTTGGTCAGGCTGGCAGTGGCAAGCTTCGTGTGTCTATGGGTCAAAGTAAACTTGCTGCAAAAGTTGCTAAGAAATTCAA GGAAAAGAGCTATGGCAGCAGTGGTGCTACATCTGGTTTAACCTCAAGTCTTGCATTTACTCCTGTGCAGGGGATTGAGC TGTCAAATCCACAGGCCCATGCACATCAACTTGGTACTGGAACTCAAAGTACCTATTTCTCTGAAACAGGAACATTTTCG AAGATCAGGAGGACTTGA
Protein sequence (LotjaGi1g1v0618800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLADSFLADLDELSDNEAEIPEDNDADAADMEEDIDGDLADLENLNYDDLDSVSKLQKTQRYVDIMQKVEEALKRSSD ASNQGVDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGL LPSAIIMVVSVTASTTTGKPLPEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNLSSIVGSAVAAKLMGTAGGL TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPALRMRACRLLAAKSTLAARVDSIRGDPSGRTGR SFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGM LGQAGSGKLRVSMGQSKLAAKVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGTGTQSTYFSETGTFS KIRRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 484 | 483 | 9.4E-264 | ||
| MobiDBLite | 13 | 39 | 27 | - | – | |
| SUPERFAMILY | 89 | 335 | 247 | 9.55E-81 | ||
| SMART | 96 | 148 | 53 | 1.0E-22 | ||
| Gene3D | 97 | 211 | 115 | 1.6E-9 | ||
| Pfam | 104 | 332 | 229 | 1.0E-71 | ||
| Gene3D | 127 | 177 | 51 | 1.6E-9 | – | |
| ProSiteProfiles | 217 | 335 | 119 | 37.97 | ||
| Gene3D | 219 | 334 | 116 | 5.8E-42 | ||
| MobiDBLite | 330 | 361 | 32 | - | – | |
| Pfam | 340 | 457 | 118 | 1.6E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Spliceosomal tri-snRNP complex assembly | The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex. | ||
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Cellular component | U4/U6 x U5 tri-snRNP complex | A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins. |
Expression pattern of LotjaGi1g1v0618800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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