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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0618800 |
| Transcript ID | LotjaGi1g1v0618800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116574241..116583780) extracted from Lotus japonicus Gifu genome v1.2.
ATCGCTTCCAACCTCTCCATAGACATGGTTGGTACCTTCTCTTTCTACCCTTTGTTCGATTTTACCTTGTTCCATGTTTT CGTCGCCGTTTTTGTGTTTCTAACTTTGAACACAGCATCCTTAAATTTTCCAATTTTTGTTGTTGTTGTTGTGTTTGATT CTAGGCTACACTTGCCGATTCTTTTCTCGCCGACCTCGATGAACTCTCTGATAACGAAGCTGAAATTCCCGTGAGTGTAA TCGTTTTTTGAAACTTGTGAATTTTGAAGGAAAATGTTTTTTGAGATGAAATTGATGATGAATAACCCTTATTGCAGGAG GATAATGACGCTGATGCTGCAGATATGGAAGAAGATATTGATGGAGACTTGGCTGATCTAGAAAACCTCAACTATGATGA CTTGGACAGTGTTTCCAAGCTGCAGAAAACCCAGAGATACGTTGATATTATGCAGGTTAGTTAGTAATCCTTCACTTTCA AGTGGGTTTAAGTTGTGCTTGCCGTTGTGATTGATGCAACTAACAAACAATTGTGAACACCTTGAAACCGAAGCAGCGAT TGCGGTTGTGGTTGGCTGGTTGCTATTGCATTCTTTCTTAATTATGACAGAATCTAGAATTAATTCAACTAAGCTGTGCA TTGGTTGAAAATGAAGCTTTTAACATCCTATGTTTATTTTTATGTTTTCTAATATCTGGGGTGCTTCTAATTTATTTAGG TTTGTATTGACGTGGTGTGACAATTAATGTTATTCTTTATGGCAGAAAGTGGAAGAAGCCCTTAAAAGGAGTTCAGATGC ATCCAATCAGGGGGTAGATTTAGAAGATGATCCTGAATACCAATTGATTGTGGAATGCAATGCACTGTCAGTTGACATTG AGAATGAAATTGTTATTATTCACAATTTTATTCGTGACAAGTATCGCTTGAAATTTCCAGAGCTTGAGTCACTGGTGCAT CACCCAATTGATTATGCACGTGTTGTTAAAAAGATAGGAAATGAAGTGGATCTGACTCTTGTTGATCTAGAAGGGCTTTT ACCCTCAGCCATTATCATGGTTGTCTCAGTTACAGCGTCAACTACGACTGGCAAACCACTTCCCGAAGAAGTCCTTAGTA AGACAATTGAGGCTTGTGATCGAGCTCTTGCTCTTGATTCAGCGAAGAAGAAAGTTCTTGATTTTGTTGAGAGTAGAATG GGGTACATTGCACCTAATCTTTCTTCCATAGTTGGGAGTGCTGTTGCAGCTAAACTCATGGGGACGGCTGGTGGTTTAAC ATCTCTTGCAAAGATGCCTGCTTGTAATGTTCAGCTTCTTGGTGCCAAGAAAAAGAATCTTGCTGGCTTCTCCACCGCAA CATCTCAATTTCGTGTAGGTTACCTAGAGCAAACGGAAATATTTCAGACCACTCCTCCTGCTTTAAGGATGCGGGCATGC CGACTCCTGGCTGCAAAGTCTACACTTGCAGCACGGGTAGATTCAATTCGTGGGGATCCATCTGGGAGAACTGGGAGGTC TTTCAAGGATGAGATCCACAAAAAAATTGAAAAGTGGCAAGAGCCCCCTCCTGCCAAGCAACCCAAACCCCTTCCAGTTC CTGATTCAGAGCCTAAAAAGAAGAGAGGTGGTCGGCGTCTTAGGAAGATGAAGGAAAGGTTAGTATAGTTTTAACTTGTT TGCTGTACTTGTTTTTCAGGCTGTAGGGTTGAGACTTGAGAGTATATTTTCTTTATACCTTTTTCGAATTTCATGACCTG TTGATTCTTATGTCAGGTATGCAGTAACAGACATGAGGAAGTTAGCCAACAGGATGCAATTTGGAATCCCTGAAGAGAGT TCTTTAGGTACAATTTACTATATTTCACTTGTACTGATCTGATTTATATTTGCAATGTGACGTTTTGCTTTTTTATTTGT AATTTGATGCATGCATTTATATTTTACTATAATTTAAATTATAAAGAACTGAGGATCGGATGGTATAAAAGAGGGAATCC AGTAATAAGCATTGAATAATTATGATGTGATACAAAATCCTTGTTAGGTGCCACTATGCTCGACCAGGTGAGAAATATGA ATAATTAGTAAGCAAATATGGGAGGGAGTTGAAGTTGGGGAATGGAATAGGGTTTTCTGTTAGGCTGTTCATAGGGGTGG CAAAGAGAAAAGCAAGTACTGAGTAAGGGAATTGAGGGGAAAGACCAGGTTCTTGGACTGCCTGGATTATGACCATTTAT TTTTCTTTGATTCAGTGTGTCTTCTTTTTCATTACACATTAAAAACTCCACCTTTGATATTACTCTGATATTTAATCAGA AGATAACTAGATGTTTGTATTCTGTTGTTCTTGAGCTGGAATGGCTAATGTTTCAATCAGGCAGAAGATAAATGTAGCCA ACTGAAATTGGGTCTGTAATCACAAGACAAATAGTGGAAAATTTGCATAAATTCGATAAATGGCCTGAAACATGTTGAAA CAGCAATTCTTTGGGATCGGAAATACAATTGTAGTAAATGGGTATAACCTGTTAGGATCCAAGCTAACAATATATGCAGA AAAGGTAATGCGCTGAAATAGAAACAACTATGATTGCTTATTGATGTCAATAGAAAGTTACAGAGAAGGAAAAGATCCTA GATTCTGCCCAGAGCTAGGCTCCTATTGGAAGCTAATGCTCCCTACTCAACATGACAGCTATGAATAATCCAAGATACCC CTCTACCTCTCATTCACTCCCCTTAAATTCTGTGGTCAGTACAATCAACCCCTCTCTCTATTCTGTTAGGCAGTTACATA GTATTCCCATTTCCCTTTCTTAGCCCTTCTAGAATATACCCTCCATACCTTTGGGCCCGCTCCCTTGTAATGGAGCAATT GCTCCTGTGCACTTGACACCTGGTCAGTGTGCCTAACAATACCCCCTCCTAGAACAGCTACCTTGTCCTCAAGGTTAAAA TCAGGAAATTGGCTCTTAATGGTTACAACATCCTCCCAAGTGGCTTCCTCCACCGATTTGCCTTGCCACTGAACTAGTAA TTGAGGTACGTCTGTACCCTGTTCCACGATCACACGAGTGGCCAACACATCATGAGGTTGCACAACTTCAGCATGTTCCC CTTCGAGGTTGTCAGGTAACTCAGCATGCTCGTCATAGTCCCCAACTGCTTTCTTGAGCAAGGACACATGAAATACAGGG TGAACGCGCGAATTTGCAGGTAATTTCAAGCGATAAGCAACTGCACCCACCCTAGCCAAGATGGGATATGGCCCGTAGTA TCGAGCTGCCAGTTTTGCGTGTACCCGGGTCACGACGGAATGTTGGCGATGAGCCCTCAATTTGACAAAGACCCATTCAC CAATTGCAAACGATTTCTCCACTCTCTTAGCATTCGCCTGATTCCTCATTCTTTCCTGCGCACAAGATAATTGGTTCCTC AGTTGCCTAAGTGCTTCATCCCTGTCCAGCAATTCTCTTTGGACAGCTTCTACACGAGTTTCACCAAGGCCCCAACGAGT GATTGCTGGGGGCTTCCGACCATAAACCACCTCAAAAGGGGTCTGATTAGTTGCGGAATGAAAAGTTGTGTTAAACCAAA ACTCAGCCCAATGCAACCAGTTTGCCCAAGTCTTAGGTTGATCGGCGGAGAAGCAACGAAGGTAAGTTTCAAGACATCGA TTTACCACCTCCGTTTGGCCATCGGTCTCAGGGTGGTAGGCAGAGCTCATCTTGAGTTGGGTCCCTTGCAAGCGAAAAAT CTCCTTCCAGAAGTGGCTCATAAAAATTGGGTCACGGTCACTTACAATGGTTGATGGACTGCCGTGCAAGCGTATGATCT CTTTGGTAAAAAGCTCTGCAATGCTTCGAGCTGTGTAAGGATGCTTCAGCGGCATAAAATGGCAATACTTGGATAAACGA TCCACCACCACCAAGATTGCTTCGAAGCCCTTGGACTTGGGTAGGCCGGTTATGAAATCGAGTGATATATCTTCCCAAAC TCTTTCTGGAATTGGCAATGGTTGTAGAAGGCCAGCTGGGGAAGAAGCTAAGTATTTATGGCGTTGGCAAGTATCGCAAC GACGTACATAGTCCTGTATCGCTCCCTTCATCCCGATCCAATACAGGTTCTCAGCCACACGACGGTATGTTCGCAGAAAC CCAGAATGCCCCCCTTGAGGGGTAGTGTGGTATTCCTGCAACATGCGAGGAATCAAAGAAGAGGTCTGAGATAGTACCAA CCGCGACTTGTAGAAGAGGATCCCTTGTCGGATGCTGAAGTCAGGATGTGAAGAAGGGTCCTTGAGTAAAGCCTCGATGA TCGACTGAAGCTTGGAGTCACCACGAATTTCCTCTGCTACTAGGAATTTCTCGTCCCAAACTGGATAAGAAACCAGAGTA CTCAGTTCTCCTCCGTCGATGATGCGCGACAGGGCATCCGCGCCCTTGTTCAACCTTCCTGGTTTGTAAACAATATCAAA GTTGTATCCCAGAAGCTTGGCAGACCAATTTTGTTGTCCTCCCGTGACAATTTTTTGATGTAACAGCTCTTTGAGGCTTT TTTGATCTATGGAGACCAAAAACTTCCGGCCCAATAGGTAAGGCCGCCAGTGTTGAATGGCAAGAGCTACTGCCATCAGT TCTTTTTCGTACGCTGATTTTGCCAGATTTCTTACCCCGAGAGCTTTGCTATAGTAGGCTATCGGGTTCTTTCCTTGCAT GAGAATAGCCCCTATTCCACTGCCTGAGGCGTCGCATTCCACTACAAATTCTTTGTCAAAATTTGGAAGAGCCAAAACAG GGGCTGTAGTCAGCTTCTCCTTGAGTGTGTCAAACGCTCGTTGTGCCTCAATTCCCCAATGGAAAGCATCTTTTTTGGTT AATTCCGTCAAAGGCCTCGCTAATTTCCCATAGTCTCGAATAAATTTTCTGTAGTACCCCGTTAGGCCCAAGAATCCCCT CACCCCCTTCGCATTGGTGGGAGTTGGCCACTGCATCACACTAATTATCTTGTTGGGATCGACGGCCACTCCCTGTTTTG AGATCAAGTGACCTAAGTACTCGACCGTCTGCTTAGCAAAACTGCACTTCTTTTTGTTTGCTGTCAACCCTTGTTTATGG AGCACGCACAATACCATTTCTAAATGAGCAAGATGAGAATCCCAATCTGAGCTGTATACTAATATATCATCAAAGAAAAC GAGGACTCCTATTCGCAGCAAAGGCCGGAAAATCTCATTCATCAAGCTCTGAAATGTAGACGGAGCATTCATGAGACCAA AGGGCATGACCATGAATTCATAATGTCCTTCGTGAGTACGAAAGGCAGTTTTGTGAACATCTTCAGCCCTCACTCGCACC TGATGATATCCTGATTTCAGGTCCAATTTTGAAAAGAATTGGGCACCATGCAGTTCATCAAGAAGTTCCTCGATCACCGG TATGGGAAACTTGTCTGGGATCGTTACTTTGTTGAGTGCTCGATAGTCAACGCACATCCTCCATGATTGATCCTTCTTCT TTACCAGAATAACCGGACTTGAATATGCACTGGTGCTTTGACGGATTATCCCATCGGATAACATTTCCTTGACCTGTTTT TCAATCTCATTTTTGTGGTGATGTGGATAACGATACGGCCTCACATTAACCGGGCCTTGCCCTTCTTTGATGTTGATACA GTGTTCCCTGCCTCGGCTTGGTGGCAAACCCACCTTTGCTTTGAAAACTCCTTCGTATTTCTCAAGTAGCTTCGCTAAAC CCGCTTGCTGGTCTGTGGTGAGGCTTTCTTCCTCGCGTTTCCCTTGTTTCACCGGTTCTAAGAGACAGAGGACCCCAGTT TCCCCTCCCTTTTCCCGACGGAGAATCTGCTGCAGTGCCACCATGGATTCCCTGCCCGCACTTAAACCCTGTAGCTTGAC CCATCGATCACCCTTCCAGAAACTTGAGATTGCCAATTAGCGATCGTATCCCCCAATGTCTTCAACCATTCGATCCCCAA AACCATGTCAGGCCCCCCTAGCTCGAACAGATGTGGATTGCATTCGAGGGAATAATCCCCCATTACAAGTTCAATGCTCC TACAGCGGCCTCGGGCGTGGGTTTGAAACCCATCTCCTAGCTTGATGGTCATTCTTGGTGTGTCTTCTACCTCCCAATTC ATGCGTTGCACGAGCTTGAGGTCAATGAAATTGTGGGTTGCCCCACTGTCAACCAACACCAACATAGGAACTCCACGAAT TGTACCCTGTAGCTTCATCGTTTGGGGCTGTTCCTGAAGAGTATTTGCCATGTTGTAAAAACTCATCATACTCATTTCAC CTTGGTCTCCTTCTTCCTGCTCCTCTACTTCCATGGCTAGCACATTCCCGTCCTCAGTTTCTTCATCCCCCTCTTCTACT ATGAGAACTCTCAATTGCTTATCTGGACATTGATGTAAGGGGTGGTATGGTCCTCCACATTTGAAGCACTGACCCTTCTG CCTACGTTCCAGTAATTGTGGATAGGTCAAGTGAGAAAACCCTCTATCTCGCGGCCCAACTCGTCTTTCTGTTTGATTTT TTGTTTCAACCTTTGGGCCATTAAAAACTGCCTTGGTGGTAGGCCCGGAGTCTTTAGTGTCTTTGACCCATACCCAATCT GCACCACCCGTTCGTCCTGATCCACCCGACCCGGTCTTGAACCCTGAATTTCCAAACCGATTACTCCTTGAGTAACCCGA TCCGGTATCCCCCTTCACCTCCTTCTCTACTGCCCTAGTCACCGCCAGCAATTTTGATCGGCTAACTCCTCCCATCGCCG CCAGACTACGGACCTTCCCACGGAGCTCCTCCTTCAAACCATGGAGGAAATAGCCCTGAAATTGCTTATCGGGCAATTTA GGGATTTGAGCGGTGAGGTACTCAAATTCGATGATGTATTCTTCCACCGTCCCTTTCTGTCGCAGCTCGGTGAGTTGCTC ATACACGTCACCAATACCGTGTCCTCCGTATCGCTCCAGTAATGCTTCACGCAACCGCTCCCATGTCAGCGATTCCTCCG CTTCAAGAAGAGCATTGTAGAAATGGATTGTGGGTCCATCCATGCTCAGTTGTGCTAAACTCACCTTGACCTCCGGTGAT GTTTCCTGAACCTTGAAGTATATCTCAGCTCGAGATATCCAGCCCGCGGGGTCCTTGCCATAAAAAACCGGAAGCTCTAC TTTCTTTACCGATTGACGGAACTCCGTCAGCGCCTCACCGTGCAGCTGGTGAGCTCGCCGCTCCCCTCCTGAGATCTGGT TCAGATTTATCACCTGCTCCACAGATCCCGTTCGCACGCCAGAACTACCTCCAATGTCGCGATTGACACTCGTCTCCTCA ACGTGGACTGATTTCCCCAGTGATCGTTCCATCAAAGCTACCAACGACGTTGGTAGATCCTTGACTGCGGTGGTGACCGC TGCTAGAGATGATCGCACCTCTGCAAGCTCCGACTCCAGCGCATCGATTTTCGCTTCCATGAGGTTCGTCGATTGTTTGG ATTTTCTGGGTGGCATCCACTGGCTCCGTTTCCGGATCCGGCAGGTCGGACCAAATTGTTAGGATCCAAGCTAACAATAT ATGCAGAAAAGGTAATGCGCTGAAATAGAAACAACTATGATTGCTTATTGATGTCAATAGAAAGTTACAGAGAAGGAAAA GATCCTAGATTCTGCCCAGAGCTAGGCTCCTATAGGAAGCTAATGCTCCCTACTCAACATGACAGCTATGAATAATCCAA GATACCCCTCTACCTCTCATTCACTCCCCTTATATTCTGTGGTCAGTACAATCAACCCCTCTCTCTATTCTGTTAGGCAG TTACATAGTATTCCCTTTCTTAGCCCTTCTAGAATATACCCTCCATACCTTTGGGCCCGCTCCCTTGTAATGGAGCAATT GCTCCTGTGCACTTGACACCTGGTCAGTGTGCCTAACATAACCTCTACAACCTTGAGGCAGAATATTCTGCTAAAAACTG TTACCTGATTCCCCGTCAATAATCCAGGTCAAAGTATTAGTGTACCTGTACCAGCCCACCCAAATTTCCATTCAAACGTA ATAAGAGTCATAAAGTCTTTAGTAGTCCTAACTCAGTGATAAAGACAGTATGAAATCCTTACGAACATGACTTCAGCTTT TTTTAATTATTCTTTTAATATTGTTAATTTGTAAAAATTTCAACATCTCCTTACTCTTTTATTTATGCTTTGGTTATAGG TGATGGTCTGGGTGAGGGTTATGGAATGCTTGGTCAGGCTGGCAGTGGCAAGCTTCGTGTGTCTATGGGTCAAAGTAAAC TTGCTGCAAAAGTTGCTAAGAAGTAAGTCCTTGTTGCTTTTAGTTCTACGTATCTTATTATGTTCTGGTTACTTTATTTT GTTGCAAGATGCTGAATCATATTTCCTGTCAAGCTATACTACTAGCTGATATGAATGACAATTCTGATGGCTTATTTTCA TTTATCAGATTCAAGGAAAAGAGCTATGGCAGCAGTGGTGCTACATCTGGTTTAACCTCAAGTCTTGCATTTACTCCTGT GCAGGTCAGCATCATGAATTACTGTTTCTGGAACTTTTCTCTTGCTTTGTAGCAGTTTAGCTCCATATCTAGTGTATGAA CTGTTAGTTTTGTGTAAAAATGGCAATGGTATGTGAGACCTATGATGGAAACCTTGTAAAGTATGAGAAGCTGAAACACA TATTTAGGGACAGGAATCAGTGGGTTGCTTCCCTACTGCTATTTTGACAGATTTATAAGGCTGCTATGAGGGGCTCAAGC AGTTATTAAGATGACACTGGTGATTCAGTGAGTGTCCGAATAAATATGGCAACATTATACATTGCAGGGGCTACACCTGG GCCTTCAAAATTAGAGACATTGAACCCCATTGGAGTAAAGAATCACCATCTTTTGGGACAAAGAACAATAAGCTTCCTAG TTCCATATTTATTCGGACACATTGCCCATTTACCCACTTCCACATCTCTATTGTCCTCTCCGAAGCGATTTTGTTGCTGA TAGAGGATTATAGGCTGTGATTTCCCTGGTCTTCTCACTTATGCAAACTGCAGTCTTATAGTCTGTGATTTAGTCAGTGT ATCCAATGAATATGATTCTCTACTCAGATGAGGATGGTAAATGGATTACATCGGTTACCAATCTGTGACATCATCAAGCA AGTTCTCTAAATGTCGTGTCCATTTGTGCCTTGTGAAACCCTGTTATCATTTGCCAATGCTGGTGTTATCTGTAAAATAG TTGGAAAAACTTCTAGTTCAGCATGGATGACGCTTAAATCACTATACTGATATTCAGCATGGATGACGCTTAAATCCCAA TAACTTAAGTTGATTAGTTTACTTCTATGAAGTTTTGCATTCAAGTTCATGTATATCTTTGTTTATTTTCAGGGGATTGA GCTGTCAAATCCACAGGCCCATGCACATCAACTTGGTACTGGAACTCAAAGTACCTATTTCTCTGAAACAGGAACATTTT CGAAGATCAGGAGGACTTGA
CDS sequence (LotjaGi1g1v0618800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGATATTGATGGAGACTTGGCTGATCTAGAAAACCTCAACTATGATGACTTGGACAGTGTTTCCAAGCTGCA GAAAACCCAGAGATACGTTGATATTATGCAGAAAGTGGAAGAAGCCCTTAAAAGGAGTTCAGATGCATCCAATCAGGGGG TAGATTTAGAAGATGATCCTGAATACCAATTGATTGTGGAATGCAATGCACTGTCAGTTGACATTGAGAATGAAATTGTT ATTATTCACAATTTTATTCGTGACAAGTATCGCTTGAAATTTCCAGAGCTTGAGTCACTGGTGCATCACCCAATTGATTA TGCACGTGTTGTTAAAAAGATAGGAAATGAAGTGGATCTGACTCTTGTTGATCTAGAAGGGCTTTTACCCTCAGCCATTA TCATGGTTGTCTCAGTTACAGCGTCAACTACGACTGGCAAACCACTTCCCGAAGAAGTCCTTAGTAAGACAATTGAGGCT TGTGATCGAGCTCTTGCTCTTGATTCAGCGAAGAAGAAAGTTCTTGATTTTGTTGAGAGTAGAATGGGGTACATTGCACC TAATCTTTCTTCCATAGTTGGGAGTGCTGTTGCAGCTAAACTCATGGGGACGGCTGGTGGTTTAACATCTCTTGCAAAGA TGCCTGCTTGTAATGTTCAGCTTCTTGGTGCCAAGAAAAAGAATCTTGCTGGCTTCTCCACCGCAACATCTCAATTTCGT GTAGGTTACCTAGAGCAAACGGAAATATTTCAGACCACTCCTCCTGCTTTAAGGATGCGGGCATGCCGACTCCTGGCTGC AAAGTCTACACTTGCAGCACGGGTAGATTCAATTCGTGGGGATCCATCTGGGAGAACTGGGAGGTCTTTCAAGGATGAGA TCCACAAAAAAATTGAAAAGTGGCAAGAGCCCCCTCCTGCCAAGCAACCCAAACCCCTTCCAGTTCCTGATTCAGAGCCT AAAAAGAAGAGAGGTGGTCGGCGTCTTAGGAAGATGAAGGAAAGGTATGCAGTAACAGACATGAGGAAGTTAGCCAACAG GATGCAATTTGGAATCCCTGAAGAGAGTTCTTTAGGTGATGGTCTGGGTGAGGGTTATGGAATGCTTGGTCAGGCTGGCA GTGGCAAGCTTCGTGTGTCTATGGGTCAAAGTAAACTTGCTGCAAAAGTTGCTAAGAAATTCAAGGAAAAGAGCTATGGC AGCAGTGGTGCTACATCTGGTTTAACCTCAAGTCTTGCATTTACTCCTGTGCAGGGGATTGAGCTGTCAAATCCACAGGC CCATGCACATCAACTTGGTACTGGAACTCAAAGTACCTATTTCTCTGAAACAGGAACATTTTCGAAGATCAGGAGGACTT GA
Protein sequence (LotjaGi1g1v0618800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEDIDGDLADLENLNYDDLDSVSKLQKTQRYVDIMQKVEEALKRSSDASNQGVDLEDDPEYQLIVECNALSVDIENEIV IIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTIEA CDRALALDSAKKKVLDFVESRMGYIAPNLSSIVGSAVAAKLMGTAGGLTSLAKMPACNVQLLGAKKKNLAGFSTATSQFR VGYLEQTEIFQTTPPALRMRACRLLAAKSTLAARVDSIRGDPSGRTGRSFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEP KKKRGGRRLRKMKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAAKVAKKFKEKSYG SSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGTGTQSTYFSETGTFSKIRRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 452 | 452 | 1.3E-251 | ||
| SUPERFAMILY | 57 | 303 | 247 | 7.98E-81 | ||
| SMART | 64 | 116 | 53 | 1.0E-22 | ||
| Gene3D | 65 | 179 | 115 | 1.4E-9 | ||
| Pfam | 72 | 300 | 229 | 8.7E-72 | ||
| Gene3D | 95 | 145 | 51 | 1.4E-9 | – | |
| ProSiteProfiles | 185 | 303 | 119 | 37.97 | ||
| Gene3D | 187 | 302 | 116 | 5.1E-42 | ||
| MobiDBLite | 298 | 329 | 32 | - | – | |
| Pfam | 308 | 425 | 118 | 1.4E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Spliceosomal tri-snRNP complex assembly | The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex. | ||
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Cellular component | U4/U6 x U5 tri-snRNP complex | A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins. |
Expression pattern of LotjaGi1g1v0618800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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