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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032817
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We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.112s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0323739.1
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] gi|356568286|ref|XP_003552344.1| chr0 169055808 169058625 -
2 domain predictions
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Lj3g3v2095940.1
n.a. PREDICTED: protein MON2 homolog isoform 2 [Glycine max] gi|356535141|ref|XP_003536107.1| chr3 26619206 26643243 -
2 domain predictions
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Lj3g3v2095940.2
n.a. PREDICTED: protein MON2 homolog isoform 1 [Glycine max] gi|356535139|ref|XP_003536106.1| chr3 26619206 26643243 -
2 domain predictions
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Lj3g3v2095940.3
n.a. PREDICTED: protein MON2 homolog [Glycine max] gi|356574904|ref|XP_003555583.1| chr3 26619206 26621648 -
2 domain predictions
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Lj4g3v2215540.1
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like [Cicer arietinum] gi|502150646|ref|XP_004508055.1| chr4 30756956 30773367 -
2 domain predictions
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Lj4g3v2215540.2
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like [Cicer arietinum] gi|502150646|ref|XP_004508055.1| chr4 30756956 30774550 -
2 domain predictions
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LotjaGi1g1v0463300.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|G7L099|G7L099_MEDTR Brefeldin A-inhibited guanine nucleotide-exchange protein; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96822179 96837225 +
2 domain predictions
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LotjaGi1g1v0463300.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|G7L099|G7L099_MEDTR Brefeldin A-inhibited guanine nucleotide-exchange protein; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96822596 96836225 +
2 domain predictions
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LotjaGi1g1v0463300.3
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|A0A151TB78|A0A151TB78_CAJCA Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96828028 96836225 +
2 domain predictions
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LotjaGi3g1v0432300.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|A0A0B2S605|A0A0B2S605_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi3g1v0432300 LjG1.1_chr3 84390656 84398240 -
2 domain predictions
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LotjaGi3g1v0432300.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|I1N3F3|I1N3F3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432300 LjG1.1_chr3 84390656 84401316 -
2 domain predictions
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LotjaGi4g1v0318600.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604109 69621815 +
2 domain predictions
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LotjaGi4g1v0318600.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604475 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.3
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604475 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.4
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604734 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.5
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604734 69621356 +
2 domain predictions
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LotjaGi5g1v0215500.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|K7LJP9|K7LJP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105046 52131007 +
2 domain predictions
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LotjaGi5g1v0215500.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.3 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|A0A0B2Q805|A0A0B2Q805_GLYSO Protein MON2 like; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105046 52131007 +
2 domain predictions
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LotjaGi5g1v0215500.3
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|A0A0B2Q805|A0A0B2Q805_GLYSO Protein MON2 like; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105065 52128943 +
2 domain predictions
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LotjaGi5g1v0215500.4
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.3 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|A0A0B2Q805|A0A0B2Q805_GLYSO Protein MON2 like; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105078 52127851 +
2 domain predictions
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LotjaGi5g1v0215500.5
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|K7LJP9|K7LJP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105078 52127851 +
2 domain predictions
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