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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036867
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.258s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. ATP-dependent RNA helicase, putative; TAIR: AT2G30800.1 helicase in vascular tissue and tapetum; Swiss-Prot: sp|F4INY4|HVT1_ARATH DExH-box ATP-dependent RNA helicase DExH6; TrEMBL-Plants: tr|K7KB99|K7KB99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0046400 LjG1.1_chr1 6332736 6341824 -
n.a. Poly(A)-specific ribonuclease PARN-like; TAIR: AT3G25430.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q8W4C3|PARNL_ARATH Poly(A)-specific ribonuclease PARN-like; TrEMBL-Plants: tr|A0A151SIG1|A0A151SIG1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0595700 LjG1.1_chr1 113535795 113540131 +
n.a. Poly(A)-specific ribonuclease PARN-like; TAIR: AT3G25430.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q8W4C3|PARNL_ARATH Poly(A)-specific ribonuclease PARN-like; TrEMBL-Plants: tr|A0A151SIG1|A0A151SIG1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0595700 LjG1.1_chr1 113537953 113540079 +
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|A0JNC2|R3HD2_BOVIN R3H domain-containing protein 2; TrEMBL-Plants: tr|V7CXD9|V7CXD9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0658800 LjG1.1_chr1 121950331 121955326 +
n.a. Zinc finger family protein / D111/G-patch domain-containing protein; TAIR: AT3G09850.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9UTK6|YKR3_SCHPO G-patch domain-containing protein C1486.03; TrEMBL-Plants: tr|I1LZN2|I1LZN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0282900 LjG1.1_chr4 65483473 65491183 +
n.a. R3H domain protein; TAIR: AT1G03250.1 R3H domain protein; Swiss-Prot: sp|Q2KIL7|R3HD4_BOVIN R3H domain-containing protein 4; TrEMBL-Plants: tr|I1L826|I1L826_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0164600 LjG1.1_chr5 42101754 42105455 +
n.a. R3H domain protein; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q8MSX1|ENC_DROME Protein encore; TrEMBL-Plants: tr|I1LBV3|I1LBV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0204000 LjG1.1_chr5 50468786 50473526 +
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q9DCB4|ARP21_MOUSE cAMP-regulated phosphoprotein 21; TrEMBL-Plants: tr|A0A0B2NZL5|A0A0B2NZL5_GLYSO R3H domain-containing protein 2; Found in the gene: LotjaGi5g1v0267500 LjG1.1_chr5 57915389 57933310 -
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q80TM6|R3HD2_MOUSE R3H domain-containing protein 2; TrEMBL-Plants: tr|G7I367|G7I367_MEDTR Single-stranded nucleic acid-binding protein R3H; Found in the gene: LotjaGi5g1v0267500 LjG1.1_chr5 57920859 57933304 -