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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038214
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.820s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0358900.1
n.a. RAN GTPase-activating protein 2; TAIR: AT1G47200.1 WPP domain protein 2; Swiss-Prot: sp|Q9M7N6|MAF1_SOLLC MFP1 attachment factor 1; TrEMBL-Plants: tr|A0A151TTY3|A0A151TTY3_CAJCA MFP1 attachment factor 1; Found in the gene: LotjaGi1g1v0358900 LjG1.1_chr1 83356535 83357903 -
2 domain predictions
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LotjaGi5g1v0031600.1
n.a. Ran gtpase-activating protein 2; TAIR: AT5G43070.1 WPP domain protein 1; Swiss-Prot: sp|Q9FMH6|WPP1_ARATH WPP domain-containing protein 1; TrEMBL-Plants: tr|A0A151TTY3|A0A151TTY3_CAJCA MFP1 attachment factor 1; Found in the gene: LotjaGi5g1v0031600 LjG1.1_chr5 5206489 5207475 -
2 domain predictions
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LotjaGi5g1v0167100.1
n.a. RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 LjG1.1_chr5 42606007 42609217 -
2 domain predictions
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LotjaGi5g1v0167100.2
n.a. RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 LjG1.1_chr5 42606560 42608161 -
2 domain predictions
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LotjaGi5g1v0316600.1
n.a. RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 LjG1.1_chr5 63434476 63437717 +
2 domain predictions
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LotjaGi5g1v0316600.2
n.a. RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 LjG1.1_chr5 63435674 63437365 +
2 domain predictions
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