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IPR038214 is a WPP domain superfamily.
<p>The WPP domain is thought to be exclusively found in plants. The WPP stands for a tryptophan-proline-proline motif that is highly conserved in the domain [[cite:PUB00057324]]. The WPP domain is known to direct RanGAP (Ran GTPase-activating protein) to the nuclear envelope [[cite:PUB00057325]]. RanGAP is an accessory protein for the small signaling GTPase Ran, which is involved in nucleocytoplasmic transport. Non-RanGAP nuclear envelope proteins are also known to encode WPP domains, such as MFP1 attachment factor 1 (MAF1) [[cite:PUB00057324]], WPP1 [[cite:PUB00057326]] and WPP2 [[cite:PUB00057326]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RAN GTPase-activating protein 2; TAIR: AT1G47200.1 WPP domain protein 2; Swiss-Prot: sp|Q9M7N6|MAF1_SOLLC MFP1 attachment factor 1; TrEMBL-Plants: tr|A0A151TTY3|A0A151TTY3_CAJCA MFP1 attachment factor 1; Found in the gene: LotjaGi1g1v0358900 | 7 | ||
| – | Ran gtpase-activating protein 2; TAIR: AT5G43070.1 WPP domain protein 1; Swiss-Prot: sp|Q9FMH6|WPP1_ARATH WPP domain-containing protein 1; TrEMBL-Plants: tr|A0A151TTY3|A0A151TTY3_CAJCA MFP1 attachment factor 1; Found in the gene: LotjaGi5g1v0031600 | 7 | ||
| – | RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 | 13 | ||
| – | RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 | 13 | ||
| – | RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 | 13 | ||
| – | RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 16.67 |