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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038445
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 4.946s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0010900.1
n.a. Neutral ceramidase; TAIR: AT1G07380.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|G7K4V4|G7K4V4_MEDTR Neutral/alkaline non-lysosomal ceramidase; Found in the gene: LotjaGi1g1v0010900 LjG1.1_chr1 1331434 1346741 -
2 domain predictions
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LotjaGi1g1v0010900.6
n.a. Neutral ceramidase; TAIR: AT1G07380.2 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|G7K4V4|G7K4V4_MEDTR Neutral/alkaline non-lysosomal ceramidase; Found in the gene: LotjaGi1g1v0010900 LjG1.1_chr1 1340226 1346599 -
2 domain predictions
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LotjaGi1g1v0010900.7
n.a. Neutral ceramidase; TAIR: AT1G07380.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|G7K4V4|G7K4V4_MEDTR Neutral/alkaline non-lysosomal ceramidase; Found in the gene: LotjaGi1g1v0010900 LjG1.1_chr1 1340452 1346172 -
2 domain predictions
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LotjaGi6g1v0135100.1
n.a. Neutral ceramidase; TAIR: AT1G07380.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|K7MQD2|K7MQD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0135100 LjG1.1_chr6 38965960 38975372 -
2 domain predictions
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LotjaGi6g1v0135100.2
n.a. Neutral ceramidase; TAIR: AT1G07380.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase; TrEMBL-Plants: tr|A0A151UAA4|A0A151UAA4_CAJCA Neutral ceramidase; Found in the gene: LotjaGi6g1v0135100 LjG1.1_chr6 38966820 38969449 -
2 domain predictions
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LotjaGi6g1v0192400.1
n.a. Neutral ceramidase; TAIR: AT2G38010.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|A0A0B2S6C2|A0A0B2S6C2_GLYSO Neutral ceramidase; Found in the gene: LotjaGi6g1v0192400 LjG1.1_chr6 48862187 48866583 -
2 domain predictions
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LotjaGi6g1v0192400.2
n.a. Neutral ceramidase; TAIR: AT2G38010.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|I1LW98|I1LW98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0192400 LjG1.1_chr6 48862187 48866583 -
2 domain predictions
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LotjaGi6g1v0192400.3
n.a. Neutral ceramidase; TAIR: AT2G38010.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|A0A0R0GS00|A0A0R0GS00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0192400 LjG1.1_chr6 48862187 48866583 -
2 domain predictions
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