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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0192400 |
| Transcript ID | LotjaGi6g1v0192400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Neutral ceramidase; TAIR: AT2G38010.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|I1LW98|I1LW98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0192400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48862187..48866583) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCAAAATCCAATTATTGTTGCTTTGGGTTTGGTATGTGCTTGGACTTGGATACAAAGCATAGATGGTGAGTACTT AATTGGTGTGGGAAGCTATGACATGACTGGTCCTGCTGCTGATGTGAACATGATGGGTTATGCCAACTTTGAACAGAACA CTGCTGGGATTCATTTCCGGCTAAGAGCAAGAACTTTCATTGTGGCTGAGAGCCTTGGAGGTCCTAGGTTTGCCTTTGTT AATCTTGATGCTGGAATGGCATCACAGCTCCTAACTATTAAGGTGCTTGAAAGACTTAAATCAAGGTACAAAAATGTAGC TAACACTTCCTCTTATAAGCATTTTTCTAATACAGTTTTTATAGTTCATTTTATATCAGCCTTCGCAAAATAGATTTCAA GTGGTCTTGATTTTGCAAAATTGAAATTGAGTTTAGGGTCCCATTGTTTTAAAATTAAGTAGAAGTCAAGTTTAGGATCA GCTTCTGTTTCGTCGAAACTTATTTTGAAACTCAAAAGCTACTCAACTTCTTACCGGACTTAATTCTGGATTTATAATCA ATTGGAGAATAATTTCCAAACATGCAGTAAGTTTCTTATAATTAAGTTGGAGAGGGTAAATCTGGCTTTGAAAATGAGTT TTGTCTGAACAATTAATATTTTTGTTGAAGGTTTGGAAATTTGTACACTGAAGAAAACGTAGCAATCAGTGGGATTCATA CACATGCTGGCCCTGGCGGGTATCTGCAGTACGTGCTTTACTCTGTGACTTCTCTTGGTTTTGTGAAGCAGTCCTTTGAA GCCATTGCTAACGCAATAGAACAAAGTATAATTCAAGCTCACAACAACCTCAAGCCTGGTTCCATTTTTATTAACACAGG TGAACATTTCTCAGTGCCTCCATACTATAAATCAAATCAGCTTCTAACCTTTCTCTAAATATTAAAAATATGTCAAAGAA CACATATTAACATTTCTCTAAACATATATTATGAAAAACATCAGTTAATAAGAGTTTATTTAGATGAATTTATTTGAACT TATCTTATAATATAAACACATAACATTTGCTTGATTAAGCTTATAACCTAATCTATTTTGATCATTTATCCAAAAACATC TTAAATATTTGACAATTCATAAGGCTATTGGTATCCTAAAATTGAAGTAGGGTAGCATAAGATTGATAACATGTTTGGAA ATCTTTCTGCAATTGATTCTATAGCCAGAATAAGTTATGTAGAAAATCTTATGTGGGTAGCTTCCGGAAGAAAAGCTGAT TCAAACATGTTGTGAAATTCTAATATGTTGAGTTTGCTGTGGTTCTTTAGGAGATGTGAAGGAAGCAGGTATAAACAGGA GTCCAAGTGCATATCTTCTAAACCCTGCAGAGGAGAGAGCAAGATATCCCTCCAATGTTGACACTCAGATGACCCTTTTG AGGTTTGTGGATCATGCAAGTGGTAAAAGTGTTGGAGCATTCAACTGGCACGCAACACATGGAACCTCCATGAGCAGAGA AAACAAGCTTATCAGCGGAGACAACAAGGGTGTTGCTGCTAGACTCTTTGAAGATTTGTTTGCTTCTCAGACTAACTCTT CATCCTCAAACACCAATTCCACAGTACCAGGTATATTTGTTAATCAATTTCTAGAAATTTTTATACGATATTCATACAAA TTAAGCAAGTTTGGCTCAAACTGTATACTAATACTAAAATCAGAAAAATGAATTTGAATTTCCAAAATTTTCCCTTAATG CTTGTTTTAGTTAATGTTTTATTGATGATGATGCAGATATTGGTCAACTCGTGAAGAAAGCACAATCAATTAAAGCCACA GGAGGAAAGGATTGCAATCAACATACAAGCCAAGCATCTAAAGTTAGAAAGAATGATGGATCCTTATTTGTTGGATCATT TTGCCAATCAAATGTAGGAGACGTGTCACCAAATGTTCTAGGAGCATTTTGCATTGACACTGGACACCCTTGTGACTTCA ACCATTCTTCATGCAATGGCAATGACCAACTTTGTGTTGGCAGGGGACCCGGGTAATGAGTCACTCTAACGAAAGATGAG GGTGTGTTTGGATACCGGTTGAGTGCAATGTGAACAGACTTCCATTCCAATCTATAAGAAGTGTTTCGTTCATTTGTACA GGTGCCGACGGGTATCCAAACATAGCCGCATGCTTGTACGAAAAGATGTGCACATGATGTGGTTATGATTTTTCATGGAG CAGGTACCCAGATGAAATATTAAGCACAAAGATCATAGGAGAAAGGCAGTTCAAAACAGCTGTGGACCTGTTTGAGTCTG CTTCAGAGGAACTGACAGGGAACATTGACTATCGCCATGCTTATCTGAACTTCACAAACATTGAAGTTGAATTGGACACC AACAAGGTGGTTAAAACATGTCCTGCTGCCCTTGGTGCTGGTTTTGCAGCAGGAACAACAGATGGGCCAGGTGCTTTTGG GTTTCAACAAGGTGATACTGAGGTATGTGCCCTTATATAATGGTCCTGCTTTTTTTTTGTATCAGTTGTTGCTTATTCTT CTATGTGTGCAGTGCACTATTAACTAAGGTCCTTTTGTGTAGATTAATCCGTTTTTGAAAACGGTGAGGGATACGCTAAA AGAACCAAGTCAATATCAAGTGGGGTGCCAAAACCCAAAGGCAGTATTGTTAAGCACTGGAGAAATGTTTGATCCTTATC CTTGGGCGGTAAGACTACTTAATCATCAGCAATTTTTGTAAATGGTGATAACAATTGCATACTGATCATGGTGTTTTGGA TTTGTATAGCCAGCAATTCTTCCAATCCAAATTCTGAGATTGGGAAAACTCATCATTCTTTCTGTACCAGGAGGTTTGTA TCTTTGACATTGTCAAATCTATAATGGTTGAATAGAATGCACATTTCAAATAATACACAAACATTTCAATCTCATTATAC TTAAACTCTGTCTTATTATCAGGTTTCATTGGATCTATGGTCGGGTTTAAGTCTAAAAAATAGACCATGCCAAAATTTAT GGCCAGGATAGGGTCAACTGAAACCCGTCTTGACTCATCTCACAAACATCCCTAATCTCTAGTGTTATCTCATTGCGAAG TATTTCTTCTTATTAGAATGGCAAAAGCCATTATGATGTTTTTTGTTGTCAATTTTAGTATTTTTTCCCCTTTCAAATAG GTGAACAAATTTTATTTCTAGGGTTTAGAGATAGATTTCGATGAAGAAATGTGAGGTATATGGTGCTCCTTTAATCTGTG AACTAACATAGTGCATAAATGAAATTTAACTATATTTTGTAATTGCTAGTTTATATTTATGTTTTCCCCTCAAAAGATAT AAACAGAAGAGGTTATACATATGGAATATAAGAGATGATCTATAAGAGACAACTTAAGTAAATACTTGAGTTGGCTAAAT AACATGATGTTTAAGCTACTAGGAAGCTGCAATAGGCTTTTATACATATAAGATTAAAGCTTTCATATGATTTGCATAGT TGTTAAATGCAGAATGAAGCACAAACACATGCTCTAATCCTTTGACTTTGAGTATTGCAGAGTTCACAACAATGTCGGGT AGAAGGCTCAGGGAGGCAGTGAAGAAGACATTAATATCTAGCAGTAATGGAGAATTCAATAATGAAACACATGTCGTTGT TGCAGGATTGACAAATACTTACTCACAATATATCGCAACTTTTGAAGAATACCAGCAGCAACGGTACGAGGTATGGAAGA GGATACCAAGTTCTATTGGAAATCTATATCTTGAACAAATTATAATTAAATTATTGCTAATAAGCAACAATAACATATGC AGGCTGCTTCAACACTATATGGTCCTCACACATTATCAGCATACATCAAAGAATTTAAGAGACTCGCACAAGCAATGGCT GAAGGCGAGAAAATCATCGGAAAAGGTCCTTCGCCGCCAGATCTTTCATCAGTACAACTAAGCCTCTTACTTGATCCCTT TGGAGACTCAACCCCAGAAGGCATCAAATTTGGTGACATAAAGGAAGATATTGCATTTTCTAAACAAGGCTATTTTACAA AGGGAGATAGACCAAGTGCTACATTCTGGAGTGCCAACCCAAGATATGACCTTCTAACAGAAGGTACATTTGCAGCAGTC GAGAGCCTTCAAGGGGAAAGATGGATTTCTGTTCACGATGATGATGATTTAAGCTTGTTTTTCAAGTGGAAAGTAGATAA TGTTTCCTCACATGGCTTAGCTACCATAGAATGGGAAATACCAAATGGTGCTGTTTCTGGAGTATACAGACTAAGACACT TTGGAGCATCAAAGAACACCATTGTCTCCCCAGTTAATTACTTTACTGGGGCTTCAAGTGCATTTGCAGTGCAATAA
CDS sequence (LotjaGi6g1v0192400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAAAATCCAATTATTGTTGCTTTGGGTTTGGTATGTGCTTGGACTTGGATACAAAGCATAGATGGTGAGTACTT AATTGGTGTGGGAAGCTATGACATGACTGGTCCTGCTGCTGATGTGAACATGATGGGTTATGCCAACTTTGAACAGAACA CTGCTGGGATTCATTTCCGGCTAAGAGCAAGAACTTTCATTGTGGCTGAGAGCCTTGGAGGTCCTAGGTTTGCCTTTGTT AATCTTGATGCTGGAATGGCATCACAGCTCCTAACTATTAAGGTGCTTGAAAGACTTAAATCAAGGTTTGGAAATTTGTA CACTGAAGAAAACGTAGCAATCAGTGGGATTCATACACATGCTGGCCCTGGCGGGTATCTGCAGTACGTGCTTTACTCTG TGACTTCTCTTGGTTTTGTGAAGCAGTCCTTTGAAGCCATTGCTAACGCAATAGAACAAAGTATAATTCAAGCTCACAAC AACCTCAAGCCTGGTTCCATTTTTATTAACACAGGAGATGTGAAGGAAGCAGGTATAAACAGGAGTCCAAGTGCATATCT TCTAAACCCTGCAGAGGAGAGAGCAAGATATCCCTCCAATGTTGACACTCAGATGACCCTTTTGAGGTTTGTGGATCATG CAAGTGGTAAAAGTGTTGGAGCATTCAACTGGCACGCAACACATGGAACCTCCATGAGCAGAGAAAACAAGCTTATCAGC GGAGACAACAAGGGTGTTGCACAATCAATTAAAGCCACAGGAGGAAAGGATTGCAATCAACATACAAGCCAAGCATCTAA AGTTAGAAAGAATGATGGATCCTTATTTGTTGGATCATTTTGCCAATCAAATGTAGGAGACGTGTCACCAAATGTTCTAG GAGCATTTTGCATTGACACTGGACACCCTTGTGACTTCAACCATTCTTCATGCAATGGCAATGACCAACTTTGTGTTGGC AGGGGACCCGGGTACCCAGATGAAATATTAAGCACAAAGATCATAGGAGAAAGGCAGTTCAAAACAGCTGTGGACCTGTT TGAGTCTGCTTCAGAGGAACTGACAGGGAACATTGACTATCGCCATGCTTATCTGAACTTCACAAACATTGAAGTTGAAT TGGACACCAACAAGGTGGTTAAAACATGTCCTGCTGCCCTTGGTGCTGGTTTTGCAGCAGGAACAACAGATGGGCCAGGT GCTTTTGGGTTTCAACAAGGTGATACTGAGATTAATCCGTTTTTGAAAACGGTGAGGGATACGCTAAAAGAACCAAGTCA ATATCAAGTGGGGTGCCAAAACCCAAAGGCAGTATTGTTAAGCACTGGAGAAATGTTTGATCCTTATCCTTGGGCGCCAG CAATTCTTCCAATCCAAATTCTGAGATTGGGAAAACTCATCATTCTTTCTGTACCAGGAGAGTTCACAACAATGTCGGGT AGAAGGCTCAGGGAGGCAGTGAAGAAGACATTAATATCTAGCAGTAATGGAGAATTCAATAATGAAACACATGTCGTTGT TGCAGGATTGACAAATACTTACTCACAATATATCGCAACTTTTGAAGAATACCAGCAGCAACGGTACGAGGCTGCTTCAA CACTATATGGTCCTCACACATTATCAGCATACATCAAAGAATTTAAGAGACTCGCACAAGCAATGGCTGAAGGCGAGAAA ATCATCGGAAAAGGTCCTTCGCCGCCAGATCTTTCATCAGTACAACTAAGCCTCTTACTTGATCCCTTTGGAGACTCAAC CCCAGAAGGCATCAAATTTGGTGACATAAAGGAAGATATTGCATTTTCTAAACAAGGCTATTTTACAAAGGGAGATAGAC CAAGTGCTACATTCTGGAGTGCCAACCCAAGATATGACCTTCTAACAGAAGGTACATTTGCAGCAGTCGAGAGCCTTCAA GGGGAAAGATGGATTTCTGTTCACGATGATGATGATTTAAGCTTGTTTTTCAAGTGGAAAGTAGATAATGTTTCCTCACA TGGCTTAGCTACCATAGAATGGGAAATACCAAATGGTGCTGTTTCTGGAGTATACAGACTAAGACACTTTGGAGCATCAA AGAACACCATTGTCTCCCCAGTTAATTACTTTACTGGGGCTTCAAGTGCATTTGCAGTGCAATAA
Protein sequence (LotjaGi6g1v0192400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQNPIIVALGLVCAWTWIQSIDGEYLIGVGSYDMTGPAADVNMMGYANFEQNTAGIHFRLRARTFIVAESLGGPRFAFV NLDAGMASQLLTIKVLERLKSRFGNLYTEENVAISGIHTHAGPGGYLQYVLYSVTSLGFVKQSFEAIANAIEQSIIQAHN NLKPGSIFINTGDVKEAGINRSPSAYLLNPAEERARYPSNVDTQMTLLRFVDHASGKSVGAFNWHATHGTSMSRENKLIS GDNKGVAQSIKATGGKDCNQHTSQASKVRKNDGSLFVGSFCQSNVGDVSPNVLGAFCIDTGHPCDFNHSSCNGNDQLCVG RGPGYPDEILSTKIIGERQFKTAVDLFESASEELTGNIDYRHAYLNFTNIEVELDTNKVVKTCPAALGAGFAAGTTDGPG AFGFQQGDTEINPFLKTVRDTLKEPSQYQVGCQNPKAVLLSTGEMFDPYPWAPAILPIQILRLGKLIILSVPGEFTTMSG RRLREAVKKTLISSSNGEFNNETHVVVAGLTNTYSQYIATFEEYQQQRYEAASTLYGPHTLSAYIKEFKRLAQAMAEGEK IIGKGPSPPDLSSVQLSLLLDPFGDSTPEGIKFGDIKEDIAFSKQGYFTKGDRPSATFWSANPRYDLLTEGTFAAVESLQ GERWISVHDDDDLSLFFKWKVDNVSSHGLATIEWEIPNGAVSGVYRLRHFGASKNTIVSPVNYFTGASSAFAVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 6 | 16 | 11 | - | – | |
| PANTHER | 7 | 247 | 241 | 0.0 | – | |
| PANTHER | 7 | 247 | 241 | 0.0 | ||
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 714 | 693 | - | – | |
| Pfam | 26 | 546 | 521 | 2.0E-222 | ||
| PANTHER | 247 | 714 | 468 | 0.0 | – | |
| PANTHER | 247 | 714 | 468 | 0.0 | ||
| Pfam | 548 | 713 | 166 | 1.3E-43 | ||
| Gene3D | 582 | 714 | 133 | 9.6E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acylsphingosine amidohydrolase activity | Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine. | ||
| Biological process | Ceramide catabolic process | The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid. |
Expression pattern of LotjaGi6g1v0192400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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