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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0010900 |
| Transcript ID | LotjaGi1g1v0010900.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Neutral ceramidase; TAIR: AT1G07380.2 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|G7K4V4|G7K4V4_MEDTR Neutral/alkaline non-lysosomal ceramidase; Found in the gene: LotjaGi1g1v0010900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1340226..1346599) extracted from Lotus japonicus Gifu genome v1.2.
CAGTCAGTCACTCACTCCTCTTTCTCTCTCTTGCAATTCACTGTTCCCTCTTCTGGCCCTGTCTCTCTGCAACCCCAGAT AGCTTCGATTACTTCTCACGCTCATGTTCGTGTAAAGATTCAAACTTTACATCTGGGTGGTGAGAAACTCAATTGCATTT CTTCCTCTATTTTTTTTGTAATTAAGTATCTATTTTGAAGCATAGTTATTTTATATTCCTGCCATGTTTGGTTGCAATTT CTGAAATTGGATTTCATTGCATTGGAAGTTATGTATTTTATATTTGAAACATAGTTATTTTATATTTATGTATGCATGTA TGAGTATGATTGTAGGTATGTACAATTGGAAGCTTTGTGAATGTGATTTGTGAAGGGAAAATAGAAGAACTGGCTAAGTT TGACTATTGGTATTTTTTTGCTTTGAACTTAGGTTGATGGAGTTACCTTCCCTCTCTCATTGGAGGGCAACTGCAACTAT GAGAGTTTGGCCTTTTTTCTTGCTCCTGATTCTACTGAAGAGTGATGTTGTATATTCAGATTCTAATTACTTGATTGGTC TTGGAAGCTATGACATCACTGGTCCTGCAGCTGATGTTAACATGATGGGGTATACTAACACAGAACAAATTGCTTCTGGG GTTCACTTCAGGCTGCGGGCTCGTACTTTTATTGCTGCTGAGCCCAAGGGTAACCGGGCAGCGTTTGTGAACCTCGATGC TTGCATGGCTTCAGATCTTATCACCACCAAAGTATTTGAGAGGCTGAAAGCAAGGTACCAATAATAACCGGGGTTGTTCC CCAGAAATTGCTGTGATAATTACTTGCAGAAATTATGGTAGATTGATTATGATTTTCTTTAATGTCTGCTAGTGAGGGCT GATGACTTGAATTAACAAAAATGTTTTGTAGACAACACCCTAATAAAAAAGAGAGAAAGGAAGAGACTAGAGAGAAACGG TAGATCTGATATATGATGTGATGGGAAGGAGATAAAAAGAAAAATGAGATGTATGTGAGGCGTCGATACTGTGGCATGTT TAAAAATCAGGATTGTTGATTTAGATTACTAATCTCAAAGTTATGTGCCTGAAGTCATACTTTAATTTGTTTGACAGATA TGGTGACCTATATACGGAAAAGAATGTAGCTATTAGTGGAACTCATACTCATGCTGGTCCTGGGGGTTTTCTCCAGTATG TTACGTATCTTGTAACATCGCTCGGATTTGTTCGCCAGTCATTTGATGTCATTGTTGATGGCATTGAGAAAAGCATCATT CAGGCTCATGAAAATCTCCGCCCAGGATCAATATTTGTCAATAAAGGTAAGGAAAGACTTGGCATTCATTTTCCTTGAGT GATGGGAGTTCTGCATACTGTTGAAGAGGTCAGAAAAGGATAAAAATCTATAGGAAGCAAGTTGCTTATTCTTTTTTCCT TGAGTTCAGTTGTTTGAAGTATCTGTATCAAATTGTTTACATTTTACTATAACCTTTGTTAAAGAGATGAAAAAATAAGG AAATTTTACTGGGTGGAAGTGGCACATGTTCAACACTAAAACCATATAAATAAATAAAAAACTGGTGCAACAATCTTGAG TCCCACATGATTAATGAGCAGTGCTATCAAATATCCACCACGGCGGAATCTCATGGCGGGTTTTTAGCTCTCCGCCATGT CCGATATCCGCCATCATTATTTGTCAAAAACGGCAGGTTTTTGGCTCTCTGACATAGTCCGCTATCCGCCATTTACAACA ATGTTAATGAGATAACTTCTTTGGAAAGAAAAAGAAAAGAAAAGAAAACTGTCAATTTATATCATCGCTTGTATCATAAG TCATAACTGAGGCACCCTGGAAAAGAAAAAGACAAGGAAAAAGGATGTAATATGAGGTTTAAATAATAAGTAACGTGTGT TGATAAGGCAACGGTAACTACAACATCCATTGATAAGTTAAAGGCAAAAAACTTAGAAGAACCTTGAATAAGGCACACTT CTAGCTTTCCCTCCATTATTTTTTTTGTTCTATTTCCTAGAGACATTGGTAACTGTAGTGAAAATATGGTTATCATTATT TTTGAGCTGTTAGTGTGATTGCTAGCAAGTGCACAAGCAGGTAGGAAATGGGTGTTCTGTTATATAAACTTTCTCCCTTC TTTCGGCGATATCAGATGGTTACAAATGTGTTATCTTCAACTTGCAGGAGAGCTTTTAGATGCTGGTGTAAATCGCAGCC CTAGTGCTTATCTCAATAATCCTGCTGCAGAAAGAAGCAAATATAAGTACAATGTTGATAAAGAAATGACTCTTTTAAAG TTTGTTGATGATGAATGGGGTCCTTCAGGAAGCTTCAATTGGTTTGCTACTCATGGGACTTCAATGAGTCGTACAAACTC GTTAATTAGTGGCGATAATAAGGGTGCTGCTGCACGATTTATGGAAGATTGGTTTGAGAAAAAAGGCTCTGCTGGATTTG AAAATGATGGCTTACCCCGAAGAATTTCCAACATAATTCCCAGTCTTCATGCTAATCGTAAGTTTTTTTCTTTTCTTTTT TTAATGTTGTACGTCAATTGATAACATTATTAGCTTCTTTCCATTATACATTGAAGAGACAAAATAAATATGTCCATTTA ATACCTTCAGAATTTGTAGGTTTATATGCCACACTCTGAAATCCTTGATGCTGCTGTAATTGATTGGATTCGAACTGTGT TCTGAAATGGTTTCGGTGATTAACTAGTCATAAATAAATATTACTACGTTAGTAACTAAGCATGTGGCAATGCATGCATG CATGTGTGTTTGTGCGTGTTCATATTCATATTTGAATGCTTAAGACTTTAATTATGCTCCTTTTTGGTAGCTGGTAAGTA GCGAATATTTAATTCTTAAGCATATACTGATACTGATCATCACTTGCATATCATATCTCCAATCTTGCTCACATAGTTGC ACATTTAGTTTATTCAAATGTCTCTTTTGGGGTAAGAGAAGCAGTGTGGCCGAATTATTCTTATGTGGTGATACATTTTG AACGTATAATATCCATCTATTTCTCTTGGTTCCATTTCGAGTGCGCATCAACATCCGCCAAATTTATTCTATTGTACATG TGCTGGATTGCATAGTCTAGTAGAACGACTTCTCATTTCTGATATGATGCTTTTAAGTTTTACAAGTTCTTTCCTGATAA ATGTCCCAATATTGGTCAAATCCAATGGAATTGTCTGCACACAAGACAAGAAGTAAATATTCTAGCAATGGCTGGTTGAG CTGTCTTGTGAAACATACGTGAATTATACCTTGCTTTCTATAAGGGATGTAATTTGATCATCATTAAGGCGAGATATCAG ATGATAATAATTAATAAATGAAATATATGTCCAATCTCACTTAAAATTTGTTGGTGCAGACCATGAATTACTGGAACTTG CCGCCTCATTCCAATCTCCTCCTGGTAGACCAGCAACCAGAACTTCAAGTGTTGCTAGACGAGTGAGGGGTGTCCTTAAG CAGGTTGACAAGCCTAGATTTGTTTCTGCATTTTGTCAATCAAATTGTGGTGATGTCAGTCCAAATACACTCGGAGCTTT TTGTTTAGACACTGGACTACCTTGTGACTTCAATCACAGTACATGTGGAGGGAAAAATGAATTATGCTACGGCCGAGGAC CTGGGTAATTATTTATTGCACACTCGCTTATTTCTCCAGTTTTTGCAAATTTACCTATGCTTATGTGATTACTAATTTCC TCCTATAAGTGATATGGCAGTTACCCAGATGAATTTGAAAGTACGCATACTATAGGGGAGAGGCAATTTAGAAAAGCAGT GGAGCTATTCAATGGAGCATCTGAACAGGTTAAAGGAAAGGTTGATTTTCGACATGCCTACATAGATTTCTCCCAGCTCG AGGTAAATCTTTCTAGTGCAGGAGCTTTTAAGGGAGCAAAGACATGTCCTGCTGCCCTGGGATTTGCACTTGCTGCTGGA ACAACAGATGGGCCAGGAGCTTTTGATTTTAAGCAAGGTGATGTTAAGGTAACCACTGATTCTATACCTTATGCTTATCC ATGATCATTGGCCTGTATACTTAAATATCTTTCAAATTCTATGCTTACTGTTTTTTCTAATTGTCTCAGGGAAATCCTTT CTGGAACACGGTTCGCAACTTACTTAAAAAGCCAGGCAAGGAACAAATAGACTGTCAGTACCCAAAGCCCATTTTGCTTG ATATCGGTGAAATGAAGATACCATATGATTGGGCAGTAAGTTCCCCATTAACCCTTTTATGTTGAATATCATGTCTTTAT GGTCTCCTGGCTCAGTTCAGCTATGTTCTCTGTGTTGATTTATTTGGAAGATAGATGGAAGGTTGACAGCATAGAAACTG GTTTTAGCATATTATTTACTTTGCTCAGAGCTTGGCATAACTTGACTGCTGTTCTTGGCATGTCCACTTTAGTTCCTTTA ATAAATTACGTAATCTCAATAAAAGATAATTACGTCTCTTATACATTTTCTTTTCTTTGGATAGAAGTCCTAGTATGCAT TCTCCAGTTATTATGGCATACATTTTCCAAGACCTGATTCGATGTTCTTTGGTGGCCTCCATTTGTCTTTGCCCATCTAT TTTCTGCCATACAGTTCTAATTTCTGACAACTTCTACTTAATCAGCTTTCGTCCTTTGTCTCATTTGCAGCCTTCAATAC TTCCAATCCAGATTCTTCGAATTGGGCAGTTTGTTATTCTTAGTGTACCAGGAGGTATGATCCCTTACTCTTAATTTCTT CTAAGATGTTTTGCTGTTGTAATTTTATCCTTTGCATTTTGAAACGTTAAGTTTCAACTATCAATGAACTTAGTTTAATG AGGAGTAATATATAACTGTATTATCAAAAAGCAAACATTCCTAGTTGTTGAATATCTTTGAGCTTAAAAGAACAAAAATA CGCTGAAGTGTTACTGATGTCATGATATTTTGGTGATTTCGATTCTGGAAGTCTGGAACTACTGGAAATTTGAATCTTCA CTTTTTTATGTGTGTCAAAATAAATATTCTAAGACCTAATGTACTCCATACGTCTTGGTCATATGTTACTGTGATATTAT GGTATACGGTTGTTGTTCTTTTCCTTGGAAATTCATGTTTACACTATGTGTGCAATTATTTGGTAGACAATCTCATTTGG CCTATGTATTTATTTGGGTGCTTCATGCTTGTTGCTATTACTTTAATTCTGGCAGAATTTACAACAATGGCTGGGAGGCG TCTACGTGATGCGGTGAAGGAAGTACTTAGTGCTGACAAAGACTTTGGTAGAAACATTCATGTTGTGCTAGCAGGGTTGA CTAATACTTATTCACAGTATGTGACTACATATGAAGAGTACGAGGTGCAAAGATATGAGGTCAGTTAACTCTTATATTTA TCACTCTCAAGTTTTTTATAACGCCTCTTCCAATTAGTCAGAGTATTGATTTTGCTTAGTGTGTTGAATTTCCGCCCCTT GCACATTTTTTCTGTCTCCCTCCCTCATGATGACAATGCGGTAACCATTATGGGCAACCATTTTTGTTGTTGTCAGGGTG CTTCGACGCTCTATGGTCCACACACACTGAGCGCATACATTCAGGAGTTTAAGAAGCTCGCGAACGCTCTCATCAGTGGC CAGCCTGTAGAACCAGGGCCACAACCCCCTGACCTCCTGAACAAGCAAATAAGCTTCTTAACACCGGTTGTGATGGATGG AACCCCTATTGGTGTACAGTTTGGGGACTGCAGCTCTGACGTACCGAAGAACGCCACCTTTAAGAAAGGTGACATGGTGT CGGTTACATTCTGGTCCGCATGCCCTCGCAATGACCTTATGACTGAAGGCACATTCTCCTTGGTTGAATTTCTCCAAGGA AAGGATACTTGGGTTCCTGCTTATGATGATGATGATTTCTGCTTGCGCTTCAAGTGGTCTAGGCCTTTTAAACTCAGTAC TCACAGTAAAGCCACCATAGAATGGAGAATCCCACAAGATGCAGCTCCTGGTGTATACAGAATAAAGCATTTTGGTGCTG CAAAGGGCTTATTAGGATCAATTCATCACTTCACAGGCTCATGTAGTGCATTTGTAGTAACACAGTAGAGGGAGGGATAC TGATTATACATGTTTACTTGGTCTGAAAGCTATTTACTATATTTACTACTTGTTGTATACTGAACTCTAGAATGATGTAC TGAATTAAAGATGATTCCAATTTCCAGCAGATATCCTTTGTTGTTCATTATTCTTGATCTCCTTCAAATTCTTTGGAGGT AATCAATCAGTTTCATTGTATTTTTCTGTGTGGGAATGGAAAATGAAAGGAAAG
CDS sequence (LotjaGi1g1v0010900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCGTGTTGATGGAGTTACCTTCCCTCTCTCATTGGAGGGCAACTGCAACTATGAGAGTTTGGCCTTTTTTCTTGCT CCTGATTCTACTGAAGAGTGATGTTGTATATTCAGATTCTAATTACTTGATTGGTCTTGGAAGCTATGACATCACTGGTC CTGCAGCTGATGTTAACATGATGGGGTATACTAACACAGAACAAATTGCTTCTGGGGTTCACTTCAGGCTGCGGGCTCGT ACTTTTATTGCTGCTGAGCCCAAGGGTAACCGGGCAGCGTTTGTGAACCTCGATGCTTGCATGGCTTCAGATCTTATCAC CACCAAAGTATTTGAGAGGCTGAAAGCAAGATATGGTGACCTATATACGGAAAAGAATGTAGCTATTAGTGGAACTCATA CTCATGCTGGTCCTGGGGGTTTTCTCCAGTATGTTACGTATCTTGTAACATCGCTCGGATTTGTTCGCCAGTCATTTGAT GTCATTGTTGATGGCATTGAGAAAAGCATCATTCAGGCTCATGAAAATCTCCGCCCAGGATCAATATTTGTCAATAAAGG AGAGCTTTTAGATGCTGGTGTAAATCGCAGCCCTAGTGCTTATCTCAATAATCCTGCTGCAGAAAGAAGCAAATATAAGT ACAATGTTGATAAAGAAATGACTCTTTTAAAGTTTGTTGATGATGAATGGGGTCCTTCAGGAAGCTTCAATTGGTTTGCT ACTCATGGGACTTCAATGAGTCGTACAAACTCGTTAATTAGTGGCGATAATAAGGGTGCTGCTGCACGATTTATGGAAGA TTGGTTTGAGAAAAAAGGCTCTGCTGGATTTGAAAATGATGGCTTACCCCGAAGAATTTCCAACATAATTCCCAGTCTTC ATGCTAATCACCATGAATTACTGGAACTTGCCGCCTCATTCCAATCTCCTCCTGGTAGACCAGCAACCAGAACTTCAAGT GTTGCTAGACGAGTGAGGGGTGTCCTTAAGCAGGTTGACAAGCCTAGATTTGTTTCTGCATTTTGTCAATCAAATTGTGG TGATGTCAGTCCAAATACACTCGGAGCTTTTTGTTTAGACACTGGACTACCTTGTGACTTCAATCACAGTACATGTGGAG GGAAAAATGAATTATGCTACGGCCGAGGACCTGGTTACCCAGATGAATTTGAAAGTACGCATACTATAGGGGAGAGGCAA TTTAGAAAAGCAGTGGAGCTATTCAATGGAGCATCTGAACAGGTTAAAGGAAAGGTTGATTTTCGACATGCCTACATAGA TTTCTCCCAGCTCGAGGTAAATCTTTCTAGTGCAGGAGCTTTTAAGGGAGCAAAGACATGTCCTGCTGCCCTGGGATTTG CACTTGCTGCTGGAACAACAGATGGGCCAGGAGCTTTTGATTTTAAGCAAGGTGATGTTAAGGGAAATCCTTTCTGGAAC ACGGTTCGCAACTTACTTAAAAAGCCAGGCAAGGAACAAATAGACTGTCAGTACCCAAAGCCCATTTTGCTTGATATCGG TGAAATGAAGATACCATATGATTGGGCACCTTCAATACTTCCAATCCAGATTCTTCGAATTGGGCAGTTTGTTATTCTTA GTGTACCAGGAGAATTTACAACAATGGCTGGGAGGCGTCTACGTGATGCGGTGAAGGAAGTACTTAGTGCTGACAAAGAC TTTGGTAGAAACATTCATGTTGTGCTAGCAGGGTTGACTAATACTTATTCACAGTATGTGACTACATATGAAGAGTACGA GGTGCAAAGATATGAGGGTGCTTCGACGCTCTATGGTCCACACACACTGAGCGCATACATTCAGGAGTTTAAGAAGCTCG CGAACGCTCTCATCAGTGGCCAGCCTGTAGAACCAGGGCCACAACCCCCTGACCTCCTGAACAAGCAAATAAGCTTCTTA ACACCGGTTGTGATGGATGGAACCCCTATTGGTGTACAGTTTGGGGACTGCAGCTCTGACGTACCGAAGAACGCCACCTT TAAGAAAGGTGACATGGTGTCGGTTACATTCTGGTCCGCATGCCCTCGCAATGACCTTATGACTGAAGGCACATTCTCCT TGGTTGAATTTCTCCAAGGAAAGGATACTTGGGTTCCTGCTTATGATGATGATGATTTCTGCTTGCGCTTCAAGTGGTCT AGGCCTTTTAAACTCAGTACTCACAGTAAAGCCACCATAGAATGGAGAATCCCACAAGATGCAGCTCCTGGTGTATACAG AATAAAGCATTTTGGTGCTGCAAAGGGCTTATTAGGATCAATTCATCACTTCACAGGCTCATGTAGTGCATTTGTAGTAA CACAGTAG
Protein sequence (LotjaGi1g1v0010900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVLMELPSLSHWRATATMRVWPFFLLLILLKSDVVYSDSNYLIGLGSYDITGPAADVNMMGYTNTEQIASGVHFRLRAR TFIAAEPKGNRAAFVNLDACMASDLITTKVFERLKARYGDLYTEKNVAISGTHTHAGPGGFLQYVTYLVTSLGFVRQSFD VIVDGIEKSIIQAHENLRPGSIFVNKGELLDAGVNRSPSAYLNNPAAERSKYKYNVDKEMTLLKFVDDEWGPSGSFNWFA THGTSMSRTNSLISGDNKGAAARFMEDWFEKKGSAGFENDGLPRRISNIIPSLHANHHELLELAASFQSPPGRPATRTSS VARRVRGVLKQVDKPRFVSAFCQSNCGDVSPNTLGAFCLDTGLPCDFNHSTCGGKNELCYGRGPGYPDEFESTHTIGERQ FRKAVELFNGASEQVKGKVDFRHAYIDFSQLEVNLSSAGAFKGAKTCPAALGFALAAGTTDGPGAFDFKQGDVKGNPFWN TVRNLLKKPGKEQIDCQYPKPILLDIGEMKIPYDWAPSILPIQILRIGQFVILSVPGEFTTMAGRRLRDAVKEVLSADKD FGRNIHVVLAGLTNTYSQYVTTYEEYEVQRYEGASTLYGPHTLSAYIQEFKKLANALISGQPVEPGPQPPDLLNKQISFL TPVVMDGTPIGVQFGDCSSDVPKNATFKKGDMVSVTFWSACPRNDLMTEGTFSLVEFLQGKDTWVPAYDDDDFCLRFKWS RPFKLSTHSKATIEWRIPQDAAPGVYRIKHFGAAKGLLGSIHHFTGSCSAFVVTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 38 | 38 | - | – | |
| SignalP_EUK | 1 | 38 | 38 | - | – | |
| PANTHER | 14 | 773 | 760 | 0.0 | – | |
| PANTHER | 14 | 773 | 760 | 0.0 | ||
| Phobius | 21 | 31 | 11 | - | – | |
| Phobius | 32 | 38 | 7 | - | – | |
| Phobius | 39 | 775 | 737 | - | – | |
| Pfam | 42 | 608 | 567 | 1.3E-230 | ||
| Pfam | 610 | 773 | 164 | 3.8E-53 | ||
| Gene3D | 641 | 775 | 135 | 2.6E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acylsphingosine amidohydrolase activity | Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine. | ||
| Biological process | Ceramide catabolic process | The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid. |
Expression pattern of LotjaGi1g1v0010900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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