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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0192400 |
| Transcript ID | LotjaGi6g1v0192400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Neutral ceramidase; TAIR: AT2G38010.1 Neutral/alkaline non-lysosomal ceramidase; Swiss-Prot: sp|Q304B9|NCASE_ARATH Neutral ceramidase; TrEMBL-Plants: tr|A0A0B2S6C2|A0A0B2S6C2_GLYSO Neutral ceramidase; Found in the gene: LotjaGi6g1v0192400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48862187..48866583) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCAAAATCCAATTATTGTTGCTTTGGGTTTGGTATGTGCTTGGACTTGGATACAAAGCATAGATGGTGAGTACTT AATTGGTGTGGGAAGCTATGACATGACTGGTCCTGCTGCTGATGTGAACATGATGGGTTATGCCAACTTTGAACAGAACA CTGCTGGGATTCATTTCCGGCTAAGAGCAAGAACTTTCATTGTGGCTGAGAGCCTTGGAGGTCCTAGGTTTGCCTTTGTT AATCTTGATGCTGGAATGGCATCACAGCTCCTAACTATTAAGGTGCTTGAAAGACTTAAATCAAGGTACAAAAATGTAGC TAACACTTCCTCTTATAAGCATTTTTCTAATACAGTTTTTATAGTTCATTTTATATCAGCCTTCGCAAAATAGATTTCAA GTGGTCTTGATTTTGCAAAATTGAAATTGAGTTTAGGGTCCCATTGTTTTAAAATTAAGTAGAAGTCAAGTTTAGGATCA GCTTCTGTTTCGTCGAAACTTATTTTGAAACTCAAAAGCTACTCAACTTCTTACCGGACTTAATTCTGGATTTATAATCA ATTGGAGAATAATTTCCAAACATGCAGTAAGTTTCTTATAATTAAGTTGGAGAGGGTAAATCTGGCTTTGAAAATGAGTT TTGTCTGAACAATTAATATTTTTGTTGAAGGTTTGGAAATTTGTACACTGAAGAAAACGTAGCAATCAGTGGGATTCATA CACATGCTGGCCCTGGCGGGTATCTGCAGTACGTGCTTTACTCTGTGACTTCTCTTGGTTTTGTGAAGCAGTCCTTTGAA GCCATTGCTAACGCAATAGAACAAAGTATAATTCAAGCTCACAACAACCTCAAGCCTGGTTCCATTTTTATTAACACAGG TGAACATTTCTCAGTGCCTCCATACTATAAATCAAATCAGCTTCTAACCTTTCTCTAAATATTAAAAATATGTCAAAGAA CACATATTAACATTTCTCTAAACATATATTATGAAAAACATCAGTTAATAAGAGTTTATTTAGATGAATTTATTTGAACT TATCTTATAATATAAACACATAACATTTGCTTGATTAAGCTTATAACCTAATCTATTTTGATCATTTATCCAAAAACATC TTAAATATTTGACAATTCATAAGGCTATTGGTATCCTAAAATTGAAGTAGGGTAGCATAAGATTGATAACATGTTTGGAA ATCTTTCTGCAATTGATTCTATAGCCAGAATAAGTTATGTAGAAAATCTTATGTGGGTAGCTTCCGGAAGAAAAGCTGAT TCAAACATGTTGTGAAATTCTAATATGTTGAGTTTGCTGTGGTTCTTTAGGAGATGTGAAGGAAGCAGGTATAAACAGGA GTCCAAGTGCATATCTTCTAAACCCTGCAGAGGAGAGAGCAAGATATCCCTCCAATGTTGACACTCAGATGACCCTTTTG AGGTTTGTGGATCATGCAAGTGGTAAAAGTGTTGGAGCATTCAACTGGCACGCAACACATGGAACCTCCATGAGCAGAGA AAACAAGCTTATCAGCGGAGACAACAAGGGTGTTGCTGCTAGACTCTTTGAAGATTTGTTTGCTTCTCAGACTAACTCTT CATCCTCAAACACCAATTCCACAGTACCAGGTATATTTGTTAATCAATTTCTAGAAATTTTTATACGATATTCATACAAA TTAAGCAAGTTTGGCTCAAACTGTATACTAATACTAAAATCAGAAAAATGAATTTGAATTTCCAAAATTTTCCCTTAATG CTTGTTTTAGTTAATGTTTTATTGATGATGATGCAGATATTGGTCAACTCGTGAAGAAAGCACAATCAATTAAAGCCACA GGAGGAAAGGATTGCAATCAACATACAAGCCAAGCATCTAAAGTTAGAAAGAATGATGGATCCTTATTTGTTGGATCATT TTGCCAATCAAATGTAGGAGACGTGTCACCAAATGTTCTAGGAGCATTTTGCATTGACACTGGACACCCTTGTGACTTCA ACCATTCTTCATGCAATGGCAATGACCAACTTTGTGTTGGCAGGGGACCCGGGTAATGAGTCACTCTAACGAAAGATGAG GGTGTGTTTGGATACCGGTTGAGTGCAATGTGAACAGACTTCCATTCCAATCTATAAGAAGTGTTTCGTTCATTTGTACA GGTGCCGACGGGTATCCAAACATAGCCGCATGCTTGTACGAAAAGATGTGCACATGATGTGGTTATGATTTTTCATGGAG CAGGTACCCAGATGAAATATTAAGCACAAAGATCATAGGAGAAAGGCAGTTCAAAACAGCTGTGGACCTGTTTGAGTCTG CTTCAGAGGAACTGACAGGGAACATTGACTATCGCCATGCTTATCTGAACTTCACAAACATTGAAGTTGAATTGGACACC AACAAGGTGGTTAAAACATGTCCTGCTGCCCTTGGTGCTGGTTTTGCAGCAGGAACAACAGATGGGCCAGGTGCTTTTGG GTTTCAACAAGGTGATACTGAGGTATGTGCCCTTATATAATGGTCCTGCTTTTTTTTTGTATCAGTTGTTGCTTATTCTT CTATGTGTGCAGTGCACTATTAACTAAGGTCCTTTTGTGTAGATTAATCCGTTTTTGAAAACGGTGAGGGATACGCTAAA AGAACCAAGTCAATATCAAGTGGGGTGCCAAAACCCAAAGGCAGTATTGTTAAGCACTGGAGAAATGTTTGATCCTTATC CTTGGGCGGTAAGACTACTTAATCATCAGCAATTTTTGTAAATGGTGATAACAATTGCATACTGATCATGGTGTTTTGGA TTTGTATAGCCAGCAATTCTTCCAATCCAAATTCTGAGATTGGGAAAACTCATCATTCTTTCTGTACCAGGAGGTTTGTA TCTTTGACATTGTCAAATCTATAATGGTTGAATAGAATGCACATTTCAAATAATACACAAACATTTCAATCTCATTATAC TTAAACTCTGTCTTATTATCAGGTTTCATTGGATCTATGGTCGGGTTTAAGTCTAAAAAATAGACCATGCCAAAATTTAT GGCCAGGATAGGGTCAACTGAAACCCGTCTTGACTCATCTCACAAACATCCCTAATCTCTAGTGTTATCTCATTGCGAAG TATTTCTTCTTATTAGAATGGCAAAAGCCATTATGATGTTTTTTGTTGTCAATTTTAGTATTTTTTCCCCTTTCAAATAG GTGAACAAATTTTATTTCTAGGGTTTAGAGATAGATTTCGATGAAGAAATGTGAGGTATATGGTGCTCCTTTAATCTGTG AACTAACATAGTGCATAAATGAAATTTAACTATATTTTGTAATTGCTAGTTTATATTTATGTTTTCCCCTCAAAAGATAT AAACAGAAGAGGTTATACATATGGAATATAAGAGATGATCTATAAGAGACAACTTAAGTAAATACTTGAGTTGGCTAAAT AACATGATGTTTAAGCTACTAGGAAGCTGCAATAGGCTTTTATACATATAAGATTAAAGCTTTCATATGATTTGCATAGT TGTTAAATGCAGAATGAAGCACAAACACATGCTCTAATCCTTTGACTTTGAGTATTGCAGAGTTCACAACAATGTCGGGT AGAAGGCTCAGGGAGGCAGTGAAGAAGACATTAATATCTAGCAGTAATGGAGAATTCAATAATGAAACACATGTCGTTGT TGCAGGATTGACAAATACTTACTCACAATATATCGCAACTTTTGAAGAATACCAGCAGCAACGGTACGAGGTATGGAAGA GGATACCAAGTTCTATTGGAAATCTATATCTTGAACAAATTATAATTAAATTATTGCTAATAAGCAACAATAACATATGC AGGCTGCTTCAACACTATATGGTCCTCACACATTATCAGCATACATCAAAGAATTTAAGAGACTCGCACAAGCAATGGCT GAAGGCGAGAAAATCATCGGAAAAGGTCCTTCGCCGCCAGATCTTTCATCAGTACAACTAAGCCTCTTACTTGATCCCTT TGGAGACTCAACCCCAGAAGGCATCAAATTTGGTGACATAAAGGAAGATATTGCATTTTCTAAACAAGGCTATTTTACAA AGGGAGATAGACCAAGTGCTACATTCTGGAGTGCCAACCCAAGATATGACCTTCTAACAGAAGGTACATTTGCAGCAGTC GAGAGCCTTCAAGGGGAAAGATGGATTTCTGTTCACGATGATGATGATTTAAGCTTGTTTTTCAAGTGGAAAGTAGATAA TGTTTCCTCACATGGCTTAGCTACCATAGAATGGGAAATACCAAATGGTGCTGTTTCTGGAGTATACAGACTAAGACACT TTGGAGCATCAAAGAACACCATTGTCTCCCCAGTTAATTACTTTACTGGGGCTTCAAGTGCATTTGCAGTGCAATAA
CDS sequence (LotjaGi6g1v0192400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGATCCTTATCCTTGGGCGCCAGCAATTCTTCCAATCCAAATTCTGAGATTGGGAAAACTCATCATTCTTTCTGT ACCAGGAGAGTTCACAACAATGTCGGGTAGAAGGCTCAGGGAGGCAGTGAAGAAGACATTAATATCTAGCAGTAATGGAG AATTCAATAATGAAACACATGTCGTTGTTGCAGGATTGACAAATACTTACTCACAATATATCGCAACTTTTGAAGAATAC CAGCAGCAACGGTACGAGGCTGCTTCAACACTATATGGTCCTCACACATTATCAGCATACATCAAAGAATTTAAGAGACT CGCACAAGCAATGGCTGAAGGCGAGAAAATCATCGGAAAAGGTCCTTCGCCGCCAGATCTTTCATCAGTACAACTAAGCC TCTTACTTGATCCCTTTGGAGACTCAACCCCAGAAGGCATCAAATTTGGTGACATAAAGGAAGATATTGCATTTTCTAAA CAAGGCTATTTTACAAAGGGAGATAGACCAAGTGCTACATTCTGGAGTGCCAACCCAAGATATGACCTTCTAACAGAAGG TACATTTGCAGCAGTCGAGAGCCTTCAAGGGGAAAGATGGATTTCTGTTCACGATGATGATGATTTAAGCTTGTTTTTCA AGTGGAAAGTAGATAATGTTTCCTCACATGGCTTAGCTACCATAGAATGGGAAATACCAAATGGTGCTGTTTCTGGAGTA TACAGACTAAGACACTTTGGAGCATCAAAGAACACCATTGTCTCCCCAGTTAATTACTTTACTGGGGCTTCAAGTGCATT TGCAGTGCAATAA
Protein sequence (LotjaGi6g1v0192400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFDPYPWAPAILPIQILRLGKLIILSVPGEFTTMSGRRLREAVKKTLISSSNGEFNNETHVVVAGLTNTYSQYIATFEEY QQQRYEAASTLYGPHTLSAYIKEFKRLAQAMAEGEKIIGKGPSPPDLSSVQLSLLLDPFGDSTPEGIKFGDIKEDIAFSK QGYFTKGDRPSATFWSANPRYDLLTEGTFAAVESLQGERWISVHDDDDLSLFFKWKVDNVSSHGLATIEWEIPNGAVSGV YRLRHFGASKNTIVSPVNYFTGASSAFAVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 1.8E-154 | – | |
| PANTHER | 1 | 270 | 270 | 1.8E-154 | ||
| Pfam | 3 | 102 | 100 | 2.2E-44 | ||
| Pfam | 104 | 269 | 166 | 1.5E-44 | ||
| Gene3D | 138 | 270 | 133 | 1.4E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acylsphingosine amidohydrolase activity | Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine. | ||
| Biological process | Ceramide catabolic process | The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid. |
Expression pattern of LotjaGi6g1v0192400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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