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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039641
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We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.887s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0080800.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SMS4|I3SMS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0080800 LjG1.1_chr2 21498886 21499510 +
2 domain predictions
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LotjaGi2g1v0168700_LC.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|A0A151T5I7|A0A151T5I7_CAJCA Defensin-like protein 183 family; Found in the gene: LotjaGi2g1v0168700_LC LjG1.1_chr2 58089876 58090323 +
2 domain predictions
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LotjaGi2g1v0195100.1
n.a. Defensin-like protein; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|A0A151T5I7|A0A151T5I7_CAJCA Defensin-like protein 183 family; Found in the gene: LotjaGi2g1v0195100 LjG1.1_chr2 62857779 62858445 -
2 domain predictions
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LotjaGi4g1v0146700.1
n.a. Defensin; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3T1P0|I3T1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146700 LjG1.1_chr4 23707904 23708580 +
2 domain predictions
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LotjaGi4g1v0168600.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|G7ING8|G7ING8_MEDTR Defensin fusion; Found in the gene: LotjaGi4g1v0168600 LjG1.1_chr4 32400129 32400778 +
2 domain predictions
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LotjaGi4g1v0169000.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|G7ING1|G7ING1_MEDTR Defensin fusion; Found in the gene: LotjaGi4g1v0169000 LjG1.1_chr4 32497916 32498452 +
2 domain predictions
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LotjaGi6g1v0067600.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0067600 LjG1.1_chr6 12845618 12846252 -
2 domain predictions
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LotjaGi6g1v0219000_LC.1
n.a. defensin-like protein; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3T1P0|I3T1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0219000_LC LjG1.1_chr6 52115465 52116708 -
2 domain predictions
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LotjaGi6g1v0219200_LC.1
n.a. Low-molecular-weight cysteine-rich 57; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3T1P0|I3T1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0219200_LC LjG1.1_chr6 52245533 52246209 +
2 domain predictions
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LotjaGi6g1v0234600.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SMS4|I3SMS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0234600 LjG1.1_chr6 54447144 54448037 +
2 domain predictions
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LotjaGi6g1v0237200_LC.1
n.a. Defensin fusion; TAIR: AT5G38317.1 low-molecular-weight cysteine-rich 58; Swiss-Prot: sp|P82772|DF180_ARATH Putative defensin-like protein 180; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237200_LC LjG1.1_chr6 54714195 54714771 -
2 domain predictions
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LotjaGi6g1v0237300.1
n.a. Defensin fusion; TAIR: AT5G38330.1 low-molecular-weight cysteine-rich 80; Swiss-Prot: sp|P82789|DF181_ARATH Defensin-like protein 181; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237300 LjG1.1_chr6 54718872 54719505 -
2 domain predictions
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LotjaGi6g1v0237400.1
n.a. Defensin-like protein 183; TAIR: AT5G38317.1 low-molecular-weight cysteine-rich 58; Swiss-Prot: sp|P82772|DF180_ARATH Putative defensin-like protein 180; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237400 LjG1.1_chr6 54722502 54722943 -
2 domain predictions
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LotjaGi6g1v0237500.1
n.a. Low-molecular-weight cysteine-rich protein, putative; TAIR: AT5G38330.1 low-molecular-weight cysteine-rich 80; Swiss-Prot: sp|P82789|DF181_ARATH Defensin-like protein 181; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237500 LjG1.1_chr6 54726685 54727229 -
2 domain predictions
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LotjaGi6g1v0237600_LC.1
n.a. Defensin fusion; TAIR: AT5G38317.1 low-molecular-weight cysteine-rich 58; Swiss-Prot: sp|P82772|DF180_ARATH Putative defensin-like protein 180; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237600_LC LjG1.1_chr6 54749188 54749743 -
2 domain predictions
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LotjaGi6g1v0237700_LC.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237700_LC LjG1.1_chr6 54758184 54758554 -
2 domain predictions
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LotjaGi6g1v0237800_LC.1
n.a. defensin-like protein; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237800_LC LjG1.1_chr6 54762601 54763173 -
2 domain predictions
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LotjaGi6g1v0237900_LC.1
n.a. Defensin protein; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237900_LC LjG1.1_chr6 54777071 54777536 -
2 domain predictions
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LotjaGi6g1v0238000.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3SMS4|I3SMS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0238000 LjG1.1_chr6 54784260 54784914 -
2 domain predictions
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LotjaGi6g1v0238900_LC.1
n.a. defensin-like protein; TAIR: AT5G38317.1 low-molecular-weight cysteine-rich 58; Swiss-Prot: sp|P82772|DF180_ARATH Putative defensin-like protein 180; TrEMBL-Plants: tr|K7MBS6|K7MBS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0238900_LC LjG1.1_chr6 54881670 54882177 -
2 domain predictions
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LotjaGi6g1v0239000.1
n.a. Low-molecular-weight cysteine-rich protein lcr19, putative; TAIR: AT5G38330.1 low-molecular-weight cysteine-rich 80; Swiss-Prot: sp|P82789|DF181_ARATH Defensin-like protein 181; TrEMBL-Plants: tr|K7MBS6|K7MBS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0239000 LjG1.1_chr6 54897719 54898436 -
2 domain predictions
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LotjaGi6g1v0239100.1
n.a. Defensin fusion; TAIR: AT5G38330.1 low-molecular-weight cysteine-rich 80; Swiss-Prot: sp|Q9JM99|PRG4_MOUSE Proteoglycan 4; TrEMBL-Plants: tr|K7MBS5|K7MBS5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0239100 LjG1.1_chr6 54902085 54902785 -
2 domain predictions
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LotjaGi6g1v0239300.1
n.a. Defensin fusion; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3T1P0|I3T1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0239300 LjG1.1_chr6 54986300 54986903 +
2 domain predictions
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LotjaGi6g1v0239400.1
n.a. Defensin-like protein; TAIR: AT4G30074.1 low-molecular-weight cysteine-rich 19; Swiss-Prot: sp|P82733|DF183_ARATH Defensin-like protein 183; TrEMBL-Plants: tr|I3T1P0|I3T1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0239400 LjG1.1_chr6 55009672 55010315 +
2 domain predictions
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