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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039652
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.675s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0499100.1
n.a. Coatomer subunit zeta; TAIR: AT4G08520.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q8H1F4|COPZ3_ARATH Coatomer subunit zeta-3; TrEMBL-Plants: tr|A0A151SUF4|A0A151SUF4_CAJCA Coatomer subunit zeta-3; Found in the gene: LotjaGi1g1v0499100 LjG1.1_chr1 101498809 101508327 +
2 domain predictions
2 GO terms
LotjaGi1g1v0499100.2
n.a. Coatomer subunit zeta; TAIR: AT4G08520.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q8H1F4|COPZ3_ARATH Coatomer subunit zeta-3; TrEMBL-Plants: tr|A0A151SUF4|A0A151SUF4_CAJCA Coatomer subunit zeta-3; Found in the gene: LotjaGi1g1v0499100 LjG1.1_chr1 101503538 101504977 +
2 domain predictions
2 GO terms
LotjaGi3g1v0357600.1
n.a. Coatomer subunit zeta; TAIR: AT1G15370.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q9MAX5|COPZ1_ORYSJ Coatomer subunit zeta-1; TrEMBL-Plants: tr|I3S581|I3S581_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0357600 LjG1.1_chr3 73964250 73967988 +
2 domain predictions
2 GO terms
LotjaGi3g1v0422300.1
n.a. Coatomer subunit zeta; TAIR: AT4G08520.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q8H1F4|COPZ3_ARATH Coatomer subunit zeta-3; TrEMBL-Plants: tr|A0A151SHM4|A0A151SHM4_CAJCA Coatomer subunit zeta-2; Found in the gene: LotjaGi3g1v0422300 LjG1.1_chr3 83108516 83112696 -
2 domain predictions
2 GO terms
LotjaGi3g1v0422300.2
n.a. Coatomer subunit zeta; TAIR: AT3G09800.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q84LG4|COPZ2_ARATH Coatomer subunit zeta-2; TrEMBL-Plants: tr|A0A151SHM4|A0A151SHM4_CAJCA Coatomer subunit zeta-2; Found in the gene: LotjaGi3g1v0422300 LjG1.1_chr3 83109651 83111893 -
2 domain predictions
2 GO terms
LotjaGi3g1v0422300.3
n.a. Coatomer subunit zeta; TAIR: AT3G09800.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q84LG4|COPZ2_ARATH Coatomer subunit zeta-2; TrEMBL-Plants: tr|A0A151SHM4|A0A151SHM4_CAJCA Coatomer subunit zeta-2; Found in the gene: LotjaGi3g1v0422300 LjG1.1_chr3 83109913 83111893 -
2 domain predictions
2 GO terms
LotjaGi3g1v0422300.4
n.a. Coatomer subunit zeta; TAIR: AT3G09800.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q84LG4|COPZ2_ARATH Coatomer subunit zeta-2; TrEMBL-Plants: tr|A0A151SHM4|A0A151SHM4_CAJCA Coatomer subunit zeta-2; Found in the gene: LotjaGi3g1v0422300 LjG1.1_chr3 83110027 83111893 -
2 domain predictions
2 GO terms
LotjaGi6g1v0276600.1
n.a. Coatomer subunit zeta; TAIR: AT1G60970.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q6Z844|COPZ2_ORYSJ Coatomer subunit zeta-2; TrEMBL-Plants: tr|I3TAJ3|I3TAJ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0276600 LjG1.1_chr6 59355177 59358189 -
2 domain predictions
2 GO terms
LotjaGi6g1v0276600.2
n.a. Coatomer subunit zeta; TAIR: AT1G60970.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q6Z844|COPZ2_ORYSJ Coatomer subunit zeta-2; TrEMBL-Plants: tr|I3TAJ3|I3TAJ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0276600 LjG1.1_chr6 59355675 59357622 -
2 domain predictions
2 GO terms