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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002068
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 70 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.389s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0100600.1
n.a. Protein RESTRICTED TEV MOVEMENT 2; TAIR: AT5G04890.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|D9UBX6|RTM2B_ARATH Inactive protein RESTRICTED TEV MOVEMENT 2; TrEMBL-Plants: tr|K7LZA7|K7LZA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0100600 LjG1.1_chr3 12483285 12487149 +
2 domain predictions
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LotjaGi3g1v0234500.1
n.a. Heat shock protein; TAIR: AT5G54660.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|Q9FIT9|HS217_ARATH 21.7 kDa class VI heat shock protein; TrEMBL-Plants: tr|I3TA47|I3TA47_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0234500 LjG1.1_chr3 37153643 37157093 +
3 domain predictions
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LotjaGi3g1v0409700.1
n.a. Heat-shock protein, putative; TAIR: AT1G54050.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|Q9SYG1|HS174_ARATH 17.4 kDa class III heat shock protein; TrEMBL-Plants: tr|A0A0R4J3N3|A0A0R4J3N3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0409700 LjG1.1_chr3 81354670 81356674 -
3 domain predictions
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LotjaGi3g1v0544700.3
n.a. Heat shock protein; TAIR: AT4G25200.1 mitochondrion-localized small heat shock protein 23.6; Swiss-Prot: sp|P46254|HS22M_PEA Heat shock 22 kDa protein, mitochondrial; TrEMBL-Plants: tr|A0A072TL89|A0A072TL89_MEDTR Small heat shock protein; Found in the gene: LotjaGi3g1v0544700 LjG1.1_chr3 96073619 96086473 -
3 domain predictions
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LotjaGi3g1v0544700.4
n.a. Heat shock protein; TAIR: AT4G25200.1 mitochondrion-localized small heat shock protein 23.6; Swiss-Prot: sp|P46254|HS22M_PEA Heat shock 22 kDa protein, mitochondrial; TrEMBL-Plants: tr|A0A1C6ZYA7|A0A1C6ZYA7_MEDSA Mitochondrial small heat shock protein 23; Found in the gene: LotjaGi3g1v0544700 LjG1.1_chr3 96073641 96086381 -
3 domain predictions
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LotjaGi4g1v0060000.1
n.a. Heat shock protein; TAIR: AT1G07400.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein; TrEMBL-Plants: tr|I3T182|I3T182_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0060000 LjG1.1_chr4 7199317 7202208 -
3 domain predictions
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LotjaGi4g1v0060000.2
n.a. Heat shock protein; TAIR: AT1G07400.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein; TrEMBL-Plants: tr|I3T182|I3T182_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0060000 LjG1.1_chr4 7199787 7200269 -
3 domain predictions
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LotjaGi4g1v0060300.1
n.a. Class I heat shock protein; TAIR: AT1G07400.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein; TrEMBL-Plants: tr|I3T182|I3T182_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0060300 LjG1.1_chr4 7225335 7226364 +
3 domain predictions
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LotjaGi4g1v0246800.1
n.a. Heat shock family protein; TAIR: AT2G27140.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|D9UBX6|RTM2B_ARATH Inactive protein RESTRICTED TEV MOVEMENT 2; TrEMBL-Plants: tr|I1JZS1|I1JZS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0246800 LjG1.1_chr4 59818171 59820300 -
3 domain predictions
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LotjaGi5g1v0047200.1
n.a. Heat-shock protein, putative; TAIR: AT5G12020.1 17.6 kDa class II heat shock protein; Swiss-Prot: sp|P05477|HSP21_SOYBN 17.9 kDa class II heat shock protein; TrEMBL-Plants: tr|A0A0B2RVG9|A0A0B2RVG9_GLYSO 17.9 kDa class II heat shock protein; Found in the gene: LotjaGi5g1v0047200 LjG1.1_chr5 7941721 7942519 +
3 domain predictions
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LotjaGi5g1v0047300.1
n.a. Heat-shock protein, putative; TAIR: AT5G12020.1 17.6 kDa class II heat shock protein; Swiss-Prot: sp|P05477|HSP21_SOYBN 17.9 kDa class II heat shock protein; TrEMBL-Plants: tr|I1M965|I1M965_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0047300 LjG1.1_chr5 7956653 7957730 +
3 domain predictions
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LotjaGi5g1v0047600.1
n.a. Heat-shock protein, putative; TAIR: AT5G12020.1 17.6 kDa class II heat shock protein; Swiss-Prot: sp|P05477|HSP21_SOYBN 17.9 kDa class II heat shock protein; TrEMBL-Plants: tr|I3SUP2|I3SUP2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0047600 LjG1.1_chr5 8011644 8012782 +
3 domain predictions
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LotjaGi5g1v0047700.1
n.a. Heat-shock protein, putative; TAIR: AT5G12020.1 17.6 kDa class II heat shock protein; Swiss-Prot: sp|P05477|HSP21_SOYBN 17.9 kDa class II heat shock protein; TrEMBL-Plants: tr|I3SUP2|I3SUP2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0047700 LjG1.1_chr5 8024499 8025364 +
3 domain predictions
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LotjaGi5g1v0119200.1
n.a. Protein RESTRICTED TEV MOVEMENT 2; TAIR: AT5G04890.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|D9UBX6|RTM2B_ARATH Inactive protein RESTRICTED TEV MOVEMENT 2; TrEMBL-Plants: tr|A0A1J7I014|A0A1J7I014_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0119200 LjG1.1_chr5 24916461 24921170 -
3 domain predictions
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LotjaGi5g1v0195600.1
n.a. Heat-shock protein, putative; TAIR: AT4G10250.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|P19244|HSP41_PEA 22.7 kDa class IV heat shock protein; TrEMBL-Plants: tr|A0A151U5N6|A0A151U5N6_CAJCA 22.0 kDa class IV heat shock protein; Found in the gene: LotjaGi5g1v0195600 LjG1.1_chr5 49127933 49128924 -
3 domain predictions
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LotjaGi5g1v0219800.1
n.a. HSP20-like chaperones superfamily protein, putative; TAIR: AT1G54850.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|Q84K79|IDM2L_ARATH Alpha-crystallin domain-containing protein 22.3; TrEMBL-Plants: tr|I1LBD7|I1LBD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0219800 LjG1.1_chr5 52627332 52629850 -
2 domain predictions
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LotjaGi5g1v0290500.1
n.a. Class I heat shock protein; TAIR: AT1G76780.2 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|Q9LNW0|HS178_ARATH 17.8 kDa class I heat shock protein; TrEMBL-Plants: tr|G7IBZ6|G7IBZ6_MEDTR Hsp20/alpha crystallin family protein; Found in the gene: LotjaGi5g1v0290500 LjG1.1_chr5 60700034 60701291 +
3 domain predictions
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LotjaGi6g1v0100400.1
n.a. Heat shock protein, putative; TAIR: AT4G27670.1 heat shock protein 21; Swiss-Prot: sp|P09886|HS21C_PEA Small heat shock protein, chloroplastic; TrEMBL-Plants: tr|G7J2I8|G7J2I8_MEDTR Localized small heat shock protein; Found in the gene: LotjaGi6g1v0100400 LjG1.1_chr6 21899029 21908125 +
3 domain predictions
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LotjaGi6g1v0157600.1
n.a. Heat shock protein, putative; TAIR: AT4G27670.1 heat shock protein 21; Swiss-Prot: sp|P09886|HS21C_PEA Small heat shock protein, chloroplastic; TrEMBL-Plants: tr|G7J004|G7J004_MEDTR Localized small heat shock protein; Found in the gene: LotjaGi6g1v0157600 LjG1.1_chr6 43870836 43872647 -
3 domain predictions
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LotjaGi6g1v0295600.1
n.a. Heat-shock protein, putative; TAIR: AT4G21870.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|O49710|HS154_ARATH 15.4 kDa class V heat shock protein; TrEMBL-Plants: tr|I3RZQ0|I3RZQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0295600 LjG1.1_chr6 61352525 61353810 +
3 domain predictions
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